ID | 12259 | ||||
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Name | RG463 | ||||
Synonyms (4) |
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Type | RFLP | ||||
Species | Oryza sativa (Oryza sativa) [ GR_tax:013681 ] | ||||
Germplasm | |||||
Description | |||||
Tags () | None |
Marker Created: | |
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Marker Updated: | |
Internal Marker Accession: | RG463 |
DNA Treatment | PstI-digested |
Source Type | Genomic |
Source Tissue | leaf |
Source Treatment | |
Vector | pGEM4Z |
Vector Antibiotic Resistance | Ampicillin |
Fragment Size | 1.3 |
Vector Excision Enzyme | PstI |
Vector Primers | M13 forward/M13 reverse |
Overgo1 | |
Overgo2 |
Gramene Literature | McCouch-S-R, Kochert-G, Yu-Z-H, Wang-Z-Y, Khush-G-S, Coffman-W-R, Tanksley-S-D, "Molecular mapping of rice chromosomes", Theoretical and applied genetics, 1988, vol. 76, pp. 815-829 |
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Gramene Diversity Rice Marker | 1354 |
GCCTGCAGCTGCAGNAACAGAACAGAACTGATCAAGAAACCCACAGGGAGCTAGGTCACAGACATGCATGCATATACACC
AAATGAAATCAGATTTCATTTCTCAAGAACAGGGAGAGGGTTACTGGTTACAGAAGCTTACAGTGACAACCAATCCAATA
TGGCATAGCTTGTAACAAAAACCAATGTGGTGTAGTAACCCCATGCAAGTGCAGTGCAGCTGAGTGAAACCCCACACTCT
CTCACACATCATCCACTTGCAAGAAGAGAGGGAAAAAAATAACAGAGAGGCTGTATAAACAATGGCCAACCTTTTTCTGA
ACACTGCTGCTGGTTTTGCAACTTCTGCATGCAACAGCATCTTCACCATATGCAGACATGCAGTGCAATGAAACATGGCA
TCCCACAATGGGCATTTCAAATTGTGCAGCTTTGGNCTAAAGTTTCAGAGGNAATGTGCNCCATTTNAGCACTGGATTNG
GGNTTCAAGTAACCCAGNTCTCCNCCCTTAGNGGNNTCATCAGCCCTTTTTCCTTGGCAANACCCTCCCCTTCNACAACC
AACCCATCCAANCAACAAATTGCAATGCACCATGGATGGGCAANCCTT
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 12 | 24,585,902-24,586,392 bp | View Comparative Map | |||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | IGCN 1998 | BNL6.32 | 12 | 40.7-40.7 cM | View Comparative Map | |||
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QTL | CIRAD IR64/Azu DH QTL 2003 | BNL6.32 | 12 | 81.1-81.1 cM | View Comparative Map | |||
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CNRRI Tes/CB QTL 1997 | BNL6.32 | 12 | 28.5-28.5 cM | View Comparative Map | ||||
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CNRRI Tes/CB QTL 1998 | BNL6.32 | 12a | 70.7-70.7 cM | View Comparative Map | ||||
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CNRRI XeiB/Mil46 RI QTL 2002 | BNL6.32 | 12 | 68.1-68.1 cM | View Comparative Map | ||||
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CNRRI Zh97B/Mil46 RI QTL 2002 | BNL6.32 | 12 | 80.2-80.2 cM | View Comparative Map | ||||
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CNYU Naj11/Bal DH QTL 1999 | BNL6.32 | 12 | 44.3-44.3 cM | View Comparative Map | ||||
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CNZU IR1552/Azu RI QTL 2003 | BNL6.32 | 12 | 250.7-250.7 cM | View Comparative Map | ||||
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CNZU IR1552/Azu RI QTL 2004 | BNL6.32 | 12 | 15.4-15.4 cM | View Comparative Map | ||||
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Cornell V20A/glab QTL 2004 | BNL6.32 | 12 | 99.8-99.8 cM | View Comparative Map | ||||
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FAUF Gui630/Twj DH QTL 2001 | BNL6.32 | 12 | 74.8-74.8 cM | View Comparative Map | ||||
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IGCAS ZYQ8/JX17 DH QTL 2000 | BNL6.32 | 12 | 102.9-102.9 cM | View Comparative Map | ||||
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IGCAS ZYQ8/JX17 F2 QTL 1995 | BNL6.32 | 12 | 0-0 cM | View Comparative Map | ||||
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IGCN ZYQ18/JX17 DH QTL 1998 | BNL6.32 | 12 | 40.7-40.7 cM | View Comparative Map | ||||
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IRRI IR64/Azu DH QTL 2003 | BNL6.32 | 12 | 94.4-94.4 cM | View Comparative Map | ||||
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TAMU Lem/Teq RI QTL 1995 | BNL6.32 | 9a | 25-25 cM | View Comparative Map | ||||
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Zejiang IR64/Azu DH QTL 2001 | BNL6.32 | 12 | 83.9-83.9 cM | View Comparative Map | ||||
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Zhejian IR1552/Azu RI QTL 2001 | BNL6.32 | 12 | 250.7-250.7 cM | View Comparative Map | ||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Paterson 2003 | BNL6.32 | C | 46.2-46.2 cM | View Comparative Map | |||
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BNL6.32 | E | 34.7-34.7 cM | View Comparative Map | |||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | IGCN sativa/eichingeri RFLP | BNL6.32 | 12 | 23.1-23.1 cM | View Comparative Map | |||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Cornell RFLP 1994 | BNL6.32 | 12 | 100.6-100.6 cM | View Comparative Map | |||
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Cornell RFLP 2001 | BNL6.32 | 12 | 107.5-107.5 cM | View Comparative Map | ||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Huazhong RFLP 1997 | BNL6.32 | 12 | 85-85 cM | View Comparative Map | |||
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