ID | 12164 |
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Name | RG528 |
Synonyms (1) | V44 |
Type | RFLP |
Species | Oryza sativa (Oryza sativa) [ GR_tax:013681 ] |
Germplasm | |
Description | |
Tags () | None |
Marker Created: | |
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Marker Updated: | |
Internal Marker Accession: | RG528 |
DNA Treatment | PstI-digested |
Source Type | Genomic |
Source Tissue | leaf |
Source Treatment | |
Vector | pGEM4Z |
Vector Antibiotic Resistance | Ampicillin |
Fragment Size | 1.3 |
Vector Excision Enzyme | PstI |
Vector Primers | M13 forward/M13 reverse |
Overgo1 | |
Overgo2 |
Gramene Literature | McCouch-S-R, Kochert-G, Yu-Z-H, Wang-Z-Y, Khush-G-S, Coffman-W-R, Tanksley-S-D, "Molecular mapping of rice chromosomes", Theoretical and applied genetics, 1988, vol. 76, pp. 815-829 |
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Gramene Diversity Rice Marker | 793 |
Gramene Diversity Rice Marker | 1210 |
GCCTGCAGGAGGACTATATATGTACGTGTAGCATGTAGTCCTTGTTTTTGTTTTTACAATTTACACACAGTTCGCATGCT
TAATTATACGTGCATGTACGTACGTATAATCTATAGCTAGCTAGCTAGCAAAAGAAATGATGTGTGTGCGGGCAGAGAGA
AAGATGTGTTGACCCCATCAAGTAAACTTTTGGAATTTAATCGGGATTCGGGACAGAATTGGATTATATTTATGCCCCCG
TTAAAAAAAAATCAAACAGTGGTAATATTTAATTTATCGTTCGGTCAATTTTCTTCCAGTACAAATCTAAAGTTTTAGAC
TTAGTCCTACGTTTTTCGTTCTCAAGCTTGACATATGCATGCATCTGTCAACTTGGATGGTTACTTTAATTTTGCAATTC
CGATGAGTTTGATCGAATTAACCATTACTNGATTTGGTTCCAAAAATCCCATAAACCTTTAGCNAANACCCCCCCCGGCC
CAAAAAATAAGNGGGACCAATNCCTCCTTGGGATANGGAAACCANGGGGGGAACGCCANCCAGGACCCATTAACNGGNAC
TCACCCCNAAACCATTTTNAAAAAACCNCNCCCCTGGGGGGCGATGGATTTGGGTTTAAGCCCACAACGGGNAACCTTTT
AGGGCNAAGGGGNCCAAATNTTTGGGGGGGNNAANGGTGGGTGAAGGGGTTNCCCAAAAATTGNGGGGGGGNCCCCCNGN
AAAGANCCNNAACGGGGGGC
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 7 | 1,536,133-1,537,879 bp | View Comparative Map | |||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | IGCN 1998 | BNL6.32 | 7 | 141.9-141.9 cM | View Comparative Map | |||
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JRGP RFLP 2000 | BNL6.32 | 7 | 7-7 cM | View Comparative Map | ||||
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TTU CTIR 2000 | BNL6.32 | 7 | 18.6-18.6 cM | View Comparative Map | ||||
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QTL | CNHZAU Zh97/Ming63 RI QTL 2002 | BNL6.32 | 7 | 0-0 cM | View Comparative Map | |||
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CNYU Naj11/Bal DH QTL 1999 | BNL6.32 | 7 | 102.7-102.7 cM | View Comparative Map | ||||
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Cornell 9024/LH422 RI QTL 1996 | BNL6.32 | 7 | 80.1-80.1 cM | View Comparative Map | ||||
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CTIR CT9993/IR6226 QTL 2000 | BNL6.32 | 7 | 18.6-18.6 cM | View Comparative Map | ||||
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IGCAS ZYQ8/JX17 DH QTL 2000 | BNL6.32 | 7 | 0-0 cM | View Comparative Map | ||||
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IGCAS ZYQ8/JX17 F2 QTL 1995 | BNL6.32 | 7 | 49.4-49.4 cM | View Comparative Map | ||||
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IGCN ZYQ18/JX17 DH QTL 1998 | BNL6.32 | 7 | 141.9-141.9 cM | View Comparative Map | ||||
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IRRI Mor/CO39 QTL 1994 | BNL6.32 | 7 | 111.3-111.3 cM | View Comparative Map | ||||
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JRGP Nip/Kas F2 QTL 2000 | BNL6.32 | 7 | 7-7 cM | View Comparative Map | ||||
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MU CT9993/IR6226 QTL 2004 | BNL6.32 | 7 | 23-23 cM | View Comparative Map | ||||
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TNCGEB CT9993/IR6226 QTL 2004 | BNL6.32 | 7 | 12.6-12.6 cM | View Comparative Map | ||||
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Zh97/Ming63 CNHZAU F2 QTL 1999 | BNL6.32 | 5 | 218-218 cM | View Comparative Map | ||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Genetic | IGCN sativa/eichingeri RFLP | BNL6.32 | 7 | 122-122 cM | View Comparative Map | |||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Genetic | Cornell RFLP 1994 | BNL6.32 | 7 | 24-24 cM | View Comparative Map | |||
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Cornell RFLP 2001 | BNL6.32 | 7 | 0-0 cM | View Comparative Map | ||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Genetic | Huazhong RFLP 1997 | BNL6.32 | 7 | 10.2-10.2 cM | View Comparative Map | |||
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