ID | 12106 | ||
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Name | RG556 | ||
Synonyms (2) |
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Type | RFLP | ||
Species | Oryza sativa (Oryza sativa) [ GR_tax:013681 ] | ||
Germplasm | |||
Description | |||
Tags () | None |
Marker Created: | |
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Marker Updated: | |
Internal Marker Accession: | RG556 |
DNA Treatment | PstI-digested |
Source Type | Genomic |
Source Tissue | leaf |
Source Treatment | |
Vector | pGEM4Z |
Vector Antibiotic Resistance | Ampicillin |
Fragment Size | 1.5 |
Vector Excision Enzyme | PstI |
Vector Primers | M13 forward/M13 reverse |
Overgo1 | |
Overgo2 |
Gramene Literature | McCouch-S-R, Kochert-G, Yu-Z-H, Wang-Z-Y, Khush-G-S, Coffman-W-R, Tanksley-S-D, "Molecular mapping of rice chromosomes", Theoretical and applied genetics, 1988, vol. 76, pp. 815-829 |
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Gramene Diversity Rice Marker | 461 |
Gramene Diversity Rice Marker | 798 |
Gramene Diversity Rice Marker | 1361 |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 5 | 445,795-446,276 bp | View Comparative Map | |||
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BNL6.32 | Chr. 5 | 445,800-446,273 bp | View Comparative Map | |||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Cornell RFLP 1994 | BNL6.32 | 5 | -4.5--4.5 cM | View Comparative Map | |||
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BNL6.32 | 7 | 0-0 cM | View Comparative Map | |||||
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Cornell RFLP 2001 | BNL6.32 | 5 | 5.3-5.3 cM | View Comparative Map | ||||
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BNL6.32 | 7 | -1.5--1.5 cM | View Comparative Map | |||||
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Species | Type | Name | Assoc. Type |
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Oryza sativa | QTL | AQAP005 | qtl_marker |
Oryza sativa | QTL | AQAP006 | qtl_marker |
Oryza sativa | QTL | AQBK013 | qtl_marker |
Oryza sativa | QTL | AQBK016 | qtl_marker |
Oryza sativa | QTL | AQBV006 | qtl_marker |
Oryza sativa | QTL | AQCE015 | qtl_marker |
Oryza sativa | QTL | AQCU123 | qtl_marker |
Oryza sativa | QTL | AQCU133 | qtl_marker |
Oryza sativa | QTL | AQCU137 | qtl_marker |
Oryza sativa | QTL | AQCU164 | qtl_marker |
Oryza sativa | QTL | AQDR038 | qtl_marker |
Oryza sativa | QTL | AQDS005 | qtl_marker |
Oryza sativa | QTL | AQDS071 | qtl_marker |
Oryza sativa | QTL | AQDS072 | qtl_marker |
Oryza sativa | QTL | AQEA227 | qtl_marker |
Oryza sativa | QTL | AQEA228 | qtl_marker |
Oryza sativa | QTL | AQEA229 | qtl_marker |
Oryza sativa | QTL | AQEA230 | qtl_marker |
Oryza sativa | QTL | AQFV012 | qtl_marker |
Oryza sativa | QTL | AQFV013 | qtl_marker |
Oryza sativa | QTL | AQFV014 | qtl_marker |
Oryza sativa | QTL | AQFV015 | qtl_marker |
Oryza sativa | QTL | AQFV016 | qtl_marker |
Oryza sativa | QTL | AQFV017 | qtl_marker |
Oryza sativa | QTL | AQFV018 | qtl_marker |
Oryza sativa | QTL | AQFV019 | qtl_marker |
Oryza sativa | QTL | AQFW022 | qtl_marker |
Oryza sativa | QTL | AQFW032 | qtl_marker |
Oryza sativa | QTL | AQFW036 | qtl_marker |
Oryza sativa | QTL | AQFW076 | qtl_marker |
Oryza sativa | QTL | AQFW115 | qtl_marker |
Oryza sativa | QTL | AQFW143 | qtl_marker |
Oryza sativa | QTL | AQFW173 | qtl_marker |
Oryza sativa | QTL | AQFW233 | qtl_marker |
Oryza sativa | QTL | AQFW253 | qtl_marker |
Oryza sativa | QTL | CQAR15 | qtl_marker |
Oryza sativa | QTL | CQAR16 | qtl_marker |
Oryza sativa | QTL | CQJ7 | qtl_marker |
Oryza sativa | QTL | CQS7 | qtl_marker |
Oryza sativa Indica Group | Genomic DNA | AF490709 | related_sequence |
Oryza sativa Indica Group | GSS | AQ074137 | related_sequence |
Oryza sativa Indica Group | Genomic DNA | AF490709 | contained_in_sequence |