ID | 11542 |
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Name | RM287 |
Synonyms (1) | CT838 |
Type | SSR |
Species | Oryza sativa Indica Group (Oryza sativa indica) [ GR_tax:013682 ] |
Germplasm | |
Description | |
Tags () | None |
Marker Created: | |
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Marker Updated: | |
Internal Marker Accession: | RM287 |
Repeat Motif | (GA)21 |
Anneal Temperature | 55 |
Expected PCR Product Size | 118 |
Sequence Source | AF344113 |
Linkage Group | |
Remarks |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 11 | 16,767,319-16,767,617 bp | View Comparative Map | |||
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BNL6.32 | Chr. 11 | 16,767,426-16,767,532 bp | View Comparative Map | |||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Cornell SSR 2001 | BNL6.32 | 11 | 68.6-68.6 cM | View Comparative Map | |||
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QTL | CAU IRAT109/YUEFU QTL 2004 | BNL6.32 | 9 | 23.4-23.4 cM | View Comparative Map | |||
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BNL6.32 | 11b | 40.6-40.6 cM | View Comparative Map | |||||
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CNHAU Zhen97/ H94 QTL 2005 | BNL6.32 | 11 | 78.2-78.2 cM | View Comparative Map | ||||
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CNHAU Zhenshan 97/IRAT109 SSR QTL 2006 | BNL6.32 | 11 | 57.4-57.4 cM | View Comparative Map | ||||
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CNHZAU Zhe97/Wuy2 QTL 2004 | BNL6.32 | 11 | 67.8-67.8 cM | View Comparative Map | ||||
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CNNAU IR50/Tatsumimochi/Miyukimochi SSR QTL 2006 | BNL6.32 | 11 | 67.1-67.1 cM | View Comparative Map | ||||
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CNRRI XeiB/Mil46 RI QTL 2002 | BNL6.32 | 11 | 0-0 cM | View Comparative Map | ||||
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Cornell IR64/Azu DH QTL 2001 | BNL6.32 | 11 | 68.6-68.6 cM | View Comparative Map | ||||
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Cornell IR64/IRG105 QTL 2003 | BNL6.32 | 11 | 55.1-55.1 cM | View Comparative Map | ||||
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Cornell Jef/Oruf BC QTL 2003 | BNL6.32 | 11 | 68.3-68.3 cM | View Comparative Map | ||||
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IRRI RD23/Olong F2 QTL 2003 | BNL6.32 | 11 | 86.4-86.4 cM | View Comparative Map | ||||
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M202/IR50 UCD QTL 2003 | BNL6.32 | 11 | 45.1-45.1 cM | View Comparative Map | ||||
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NDSU EM93/SS18 BC QTL 2004 | BNL6.32 | 11 | 71.1-71.1 cM | View Comparative Map | ||||
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TKU Integrated QTL 2002 | BNL6.32 | 11 | 63.9-63.9 cM | View Comparative Map | ||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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QTL | USMSU O sativa CL16/O.nivara 80470 SSR QTL 2006 | BNL6.32 | 11 | 55-55 cM | View Comparative Map | |||
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Species | Type | Name | Assoc. Type |
---|---|---|---|
Oryza sativa | QTL | AQED005 | qtl_marker |
Oryza sativa | QTL | AQED029 | qtl_marker |
Oryza sativa | QTL | AQEI123 | qtl_marker |
Oryza sativa | QTL | AQEI140 | qtl_marker |
Oryza sativa | QTL | AQFP003 | qtl_marker |
Oryza sativa | QTL | AQFP013 | qtl_marker |
Oryza sativa | QTL | AQGA002 | qtl_marker |
Oryza sativa | QTL | AQGA016 | qtl_marker |
Oryza sativa Japonica Group | SSR | AUT26727 | equivalent_to |
Oryza sativa | QTL | CQAE12 | qtl_marker |
Oryza sativa | QTL | CQAE18 | qtl_marker |
Oryza sativa | QTL | CQAE22 | qtl_marker |
Oryza sativa | QTL | CQAE25 | qtl_marker |
Oryza sativa | QTL | EQC0038 | qtl_marker |
Oryza sativa Indica Group | Primer | RM287_forward | primer_forward |
Oryza sativa Indica Group | Primer | RM287_reverse | primer_reverse |
Oryza sativa Indica Group | Genomic DNA | AF344113 | contained_in_sequence |
Oryza sativa Indica Group | Genomic DNA | AF344113 | source_sequence |
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