ID | 11509 |
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Name | RM496 |
Synonyms (0) | None. |
Type | SSR |
Species | Oryza sativa Japonica Group (Oryza sativa japonica) [ GR_tax:013684 ] |
Germplasm | |
Description | |
Tags () | None |
Marker Created: | |
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Marker Updated: | |
Internal Marker Accession: | RM496 |
Repeat Motif | (TC)14 |
Anneal Temperature | 55 |
Expected PCR Product Size | 267 |
Sequence Source | AQ574182 |
Linkage Group | |
Remarks |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 10 | 22,430,134-22,430,319 bp | View Comparative Map | |||
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BNL6.32 | Chr. 10 | 22,430,134-22,430,420 bp | View Comparative Map | |||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Genetic | Cornell SSR 2001 | BNL6.32 | 10 | 113-113 cM | View Comparative Map | |||
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QTL | CNHAU Zhenshan 97/IRAT109 SSR QTL 2006 | BNL6.32 | 10 | 79-79 cM | View Comparative Map | |||
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Cornell IR64/Azu DH QTL 2001 | BNL6.32 | 10 | 113-113 cM | View Comparative Map | ||||
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Cornell IR64/IRG105 QTL 2003 | BNL6.32 | 10 | 114.6-114.6 cM | View Comparative Map | ||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
QTL | USMSU O sativa CL16/O.nivara 80470 SSR QTL 2006 | BNL6.32 | 10 | 80-80 cM | View Comparative Map | |||
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Species | Type | Name | Assoc. Type |
---|---|---|---|
Oryza sativa | QTL | AQED025 | qtl_marker |
Oryza sativa | QTL | AQEE047 | qtl_marker |
Oryza sativa | QTL | AQGM012 | qtl_marker |
Oryza sativa Japonica Group | SSR | AUT25882 | equivalent_to |
Oryza sativa | QTL | EQC0037 | qtl_marker |
Oryza sativa Japonica Group | Primer | RM496_forward | primer_forward |
Oryza sativa Japonica Group | Primer | RM496_reverse | primer_reverse |
Oryza sativa Japonica Group | GSS | AQ574182 | contained_in_sequence |
Oryza sativa Japonica Group | GSS | AQ574182 | source_sequence |