ID | 11475 | ||
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Name | RM434 | ||
Synonyms (2) |
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Type | SSR | ||
Species | Oryza sativa Japonica Group (Oryza sativa japonica) [ GR_tax:013684 ] | ||
Germplasm | |||
Description | |||
Tags () | None |
Marker Created: | |
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Marker Updated: | |
Internal Marker Accession: | RM434 |
Repeat Motif | (TC)12 |
Anneal Temperature | 55 |
Expected PCR Product Size | 152 |
Sequence Source | AQ287625 |
Linkage Group | |
Remarks |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 9 | 15,662,573-15,662,838 bp | View Comparative Map | |||
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BNL6.32 | Chr. 9 | 15,662,582-15,662,733 bp | View Comparative Map | |||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Cornell SSR 2001 | BNL6.32 | 9 | 57.7-57.7 cM | View Comparative Map | |||
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QTL | CNHAU Zhen97/ H94 QTL 2005 | BNL6.32 | 9 | 55.3-55.3 cM | View Comparative Map | |||
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CNHAU Zhenshan 97/IRAT109 SSR QTL 2006 | BNL6.32 | 9 | 41.8-41.8 cM | View Comparative Map | ||||
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Cornell IR64/Azu DH QTL 2001 | BNL6.32 | 9 | 57.7-57.7 cM | View Comparative Map | ||||
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Cornell IR64/IRG105 QTL 2003 | BNL6.32 | 9 | 49.3-49.3 cM | View Comparative Map | ||||
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NDSU EM93/SS18 BC QTL 2004 | BNL6.32 | 5 | 57.8-57.8 cM | View Comparative Map | ||||
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BNL6.32 | 9 | 57.9-57.9 cM | View Comparative Map | |||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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QTL | USMSU O sativa CL16/O.nivara 80470 SSR QTL 2006 | BNL6.32 | 9 | 55-55 cM | View Comparative Map | |||
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Species | Type | Name | Assoc. Type |
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Oryza sativa | QTL | AQA015 | qtl_marker |
Oryza sativa | QTL | AQA020 | qtl_marker |
Oryza sativa | QTL | AQGA006 | qtl_marker |
Oryza sativa | QTL | AQGA019 | qtl_marker |
Oryza sativa | QTL | AQHF039 | qtl_marker |
Oryza sativa Japonica Group | SSR | AUT24366 | equivalent_to |
Oryza sativa | QTL | EQC0034 | qtl_marker |
Oryza sativa | QTL | EQC0035 | qtl_marker |
Oryza sativa | QTL | EQC0036 | qtl_marker |
Oryza sativa Japonica Group | Primer | RM434_forward | primer_forward |
Oryza sativa Japonica Group | Primer | RM434_reverse | primer_reverse |
Oryza sativa Japonica Group | GSS | AQ287625 | contained_in_sequence |
Oryza sativa Japonica Group | GSS | AQ287625 | source_sequence |