ID | 11447 |
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Name | RM308 |
Synonyms (1) | GT119 |
Type | SSR |
Species | Oryza sativa Indica Group (Oryza sativa indica) [ GR_tax:013682 ] |
Germplasm | |
Description | |
Tags () | None |
Marker Created: | |
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Marker Updated: | |
Internal Marker Accession: | RM308 |
Repeat Motif | (AT)4-6-(GT)2T2(GT)7 |
Anneal Temperature | 55 |
Expected PCR Product Size | 132 |
Sequence Source | AF344133 |
Linkage Group | |
Remarks |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 8 | 24,791,861-24,791,993 bp | View Comparative Map | |||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Cornell SSR 2001 | BNL6.32 | 8 | 104.8-104.8 cM | View Comparative Map | |||
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QTL | CNZU IR1552/Azu RI QTL 2003 | BNL6.32 | 8 | 122.5-122.5 cM | View Comparative Map | |||
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CNZU IR1552/Azu RI QTL 2004 | BNL6.32 | 8 | 122.5-122.5 cM | View Comparative Map | ||||
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Cornell IR64/Azu DH QTL 2001 | BNL6.32 | 8 | 104.8-104.8 cM | View Comparative Map | ||||
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Cornell Jef/Oruf BC QTL 2003 | BNL6.32 | 8 | 100.6-100.6 cM | View Comparative Map | ||||
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IRRI IR622/IR600 QTL 2003 | BNL6.32 | 8 | 138-138 cM | View Comparative Map | ||||
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IRRI RD23/Olong F2 QTL 2003 | BNL6.32 | 8 | 82-82 cM | View Comparative Map | ||||
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LSU Caiapo/IRGC103544 QTL 2004 | BNL6.32 | 8 | 86-86 cM | View Comparative Map | ||||
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Species | Type | Name | Assoc. Type |
---|---|---|---|
Oryza sativa | QTL | AQFE100 | qtl_marker |
Oryza sativa | QTL | AQFE113 | qtl_marker |
Oryza sativa | QTL | AQFU017 | qtl_marker |
Oryza sativa | QTL | AQGM005 | qtl_marker |
Oryza sativa | QTL | AQGM017 | qtl_marker |
Oryza sativa | QTL | AQGP023 | qtl_marker |
Oryza sativa | QTL | CQAP1 | qtl_marker |
Oryza sativa Indica Group | Primer | RM308_forward | primer_forward |
Oryza sativa Indica Group | Primer | RM308_reverse | primer_reverse |
Oryza sativa Indica Group | Genomic DNA | AF344133 | contained_in_sequence |
Oryza sativa Indica Group | Genomic DNA | AF344133 | source_sequence |
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