ID | 11446 |
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Name | RM80 |
Synonyms (1) | TCT115 |
Type | SSR |
Species | Oryza sativa Indica Group (Oryza sativa indica) [ GR_tax:013682 ] |
Germplasm | |
Description | |
Tags () | None |
Marker Created: | |
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Marker Updated: | |
Internal Marker Accession: | RM80 |
Repeat Motif | (TCT)25 |
Anneal Temperature | 55 |
Expected PCR Product Size | 142 |
Sequence Source | AF343865 |
Linkage Group | |
Remarks |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 8 | 24,478,642-24,478,817 bp | View Comparative Map | |||
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BNL6.32 | Chr. 8 | 24,478,695-24,478,814 bp | View Comparative Map | |||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Cornell SSR 2001 | BNL6.32 | 8 | 103.7-103.7 cM | View Comparative Map | |||
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KRGRP 1998 | BNL6.32 | 8 | 117.6-117.6 cM | View Comparative Map | ||||
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QTL | CNHZAU Zhe97/Wuy2 QTL 2004 | BNL6.32 | 8 | 107.5-107.5 cM | View Comparative Map | |||
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Cornell IR64/Azu DH QTL 2001 | BNL6.32 | 8 | 103.7-103.7 cM | View Comparative Map | ||||
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IRRI IR622/IR600 QTL 2003 | BNL6.32 | 8 | 124.1-124.1 cM | View Comparative Map | ||||
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JHPRC Rei/Yamd QTL 2002 | BNL6.32 | 8 | 73.7-73.7 cM | View Comparative Map | ||||
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JUT Akihi/IRAT109 QTL 2004 | BNL6.32 | 8 | 105.6-105.6 cM | View Comparative Map | ||||
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KRGRP Mil23/Gih QTL 1998 | BNL6.32 | 8 | 117.6-117.6 cM | View Comparative Map | ||||
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TKU Integrated QTL 2002 | BNL6.32 | 8 | 77.9-77.9 cM | View Comparative Map | ||||
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TNCGEB CT9993/IR6226 QTL 2004 | BNL6.32 | 8 | 66.4-66.4 cM | View Comparative Map | ||||
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Species | Type | Name | Assoc. Type |
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Oryza sativa | QTL | AQDD008 | qtl_marker |
Oryza sativa | QTL | AQDD009 | qtl_marker |
Oryza sativa | QTL | AQDX013 | qtl_marker |
Oryza sativa | QTL | AQEI067 | qtl_marker |
Oryza sativa | QTL | AQEI127 | qtl_marker |
Oryza sativa | QTL | AQEI137 | qtl_marker |
Oryza sativa | QTL | AQFF044 | qtl_marker |
Oryza sativa | QTL | AQFF069 | qtl_marker |
Oryza sativa | QTL | AQFF072 | qtl_marker |
Oryza sativa | QTL | AQFJ055 | qtl_marker |
Oryza sativa | QTL | AQFJ071 | qtl_marker |
Oryza sativa | QTL | AQFJ076 | qtl_marker |
Oryza sativa | QTL | AQGM005 | qtl_marker |
Oryza sativa | QTL | AQGM017 | qtl_marker |
Oryza sativa | QTL | AQGP009 | qtl_marker |
Oryza sativa | QTL | AQGP074 | qtl_marker |
Oryza sativa Japonica Group | SSR | AUT23362 | equivalent_to |
Oryza sativa | QTL | CQAP1 | qtl_marker |
Oryza sativa Indica Group | Primer | RM80_forward | primer_forward |
Oryza sativa Indica Group | Primer | RM80_reverse | primer_reverse |
Oryza sativa Indica Group | Genomic DNA | AF343865 | contained_in_sequence |
Oryza sativa Indica Group | Genomic DNA | AF343865 | source_sequence |
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