ID | 11441 |
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Name | RM223 |
Synonyms (1) | CT195 |
Type | SSR |
Species | Oryza sativa Indica Group (Oryza sativa indica) [ GR_tax:013682 ] |
Germplasm | |
Description | |
Tags () | None |
Marker Created: | |
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Marker Updated: | |
Internal Marker Accession: | RM223 |
Repeat Motif | (CT)25 |
Anneal Temperature | 55 |
Expected PCR Product Size | 165 |
Sequence Source | AF344044 |
Linkage Group | |
Remarks |
Gramene Literature | Chen-X, Temnykh-S, Xu-Y, Cho-Y-G, McCouch-S-R, "Development of a microsatellite framework map providing genome-wide coverage in rice (Oryza sativa L.)", Theoretical and applied genetics, 1997, vol. 95, pp. 553-567 |
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Gramene Diversity Rice Marker | 195 |
Gramene Diversity Rice Marker | 1236 |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 8 | 20,650,060-20,650,244 bp | View Comparative Map | |||
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BNL6.32 | Chr. 8 | 20,650,071-20,650,257 bp | View Comparative Map | |||||
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BNL6.32 | Chr. 8 | 20,650,099-20,650,246 bp | View Comparative Map | |||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Cornell SSR 2001 | BNL6.32 | 8 | 80.5-80.5 cM | View Comparative Map | |||
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IGCN 1998 | BNL6.32 | 8 | 103-103 cM | View Comparative Map | ||||
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IRMI 2003 | BNL6.32 | 8 | 75.7-75.7 cM | View Comparative Map | ||||
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QTL | Brazil BG90-2/RS16 QTL 2002 | BNL6.32 | 8 | 77.1-77.1 cM | View Comparative Map | |||
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CNHZAU Zh97/Ming63 RI QTL 2002 | BNL6.32 | 8 | 53.8-53.8 cM | View Comparative Map | ||||
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Cornell IR64/Azu DH QTL 2001 | BNL6.32 | 8 | 80.5-80.5 cM | View Comparative Map | ||||
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Cornell IR64/IRG105 QTL 2003 | BNL6.32 | 8 | 75.5-75.5 cM | View Comparative Map | ||||
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Cornell Jef/Oruf BC QTL 2003 | BNL6.32 | 8 | 68.2-68.2 cM | View Comparative Map | ||||
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IGCN ZYQ18/JX17 DH QTL 1998 | BNL6.32 | 8 | 103-103 cM | View Comparative Map | ||||
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INDIR IR58025/O. rufipogon BC SSR QTL 2005 | BNL6.32 | 8 | 84-84 cM | View Comparative Map | ||||
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IRRI Lem/Teq RI QTL 2001 | BNL6.32 | 8 | 107.3-107.3 cM | View Comparative Map | ||||
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IRRI RD23/Olong F2 QTL 2003 | BNL6.32 | 8 | 58.9-58.9 cM | View Comparative Map | ||||
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M202/IR50 UCD QTL 2003 | BNL6.32 | 8 | 0.1-0.1 cM | View Comparative Map | ||||
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TKU Integrated QTL 2002 | BNL6.32 | 8 | 54.4-54.4 cM | View Comparative Map | ||||
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TTU IR64/Orufi RI QTL 2003 | BNL6.32 | 8 | 40.1-40.1 cM | View Comparative Map | ||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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QTL | USMSU O sativa CL16/O.nivara 80470 SSR QTL 2006 | BNL6.32 | 8 | 75.7-75.7 cM | View Comparative Map | |||
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