ID | 11434 |
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Name | RM72 |
Synonyms (1) | ATT35 |
Type | SSR |
Species | Oryza sativa Indica Group (Oryza sativa indica) [ GR_tax:013682 ] |
Germplasm | |
Description | |
Tags () | None |
Marker Created: | |
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Marker Updated: | |
Internal Marker Accession: | RM72 |
Repeat Motif | (TAT)5C(ATT)15 |
Anneal Temperature | 55 |
Expected PCR Product Size | 166 |
Sequence Source | AF344086 |
Linkage Group | |
Remarks |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Cornell SSR 2001 | BNL6.32 | 8 | 60.9-60.9 cM | View Comparative Map | |||
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QTL | CAU IRAT109/YUEFU QTL 2004 | BNL6.32 | 8a | 127.6-127.6 cM | View Comparative Map | |||
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CNHAU Zhen97/ H94 QTL 2005 | BNL6.32 | 8 | 39.7-39.7 cM | View Comparative Map | ||||
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CNHAU Zhenshan 97/IRAT109 SSR QTL 2006 | BNL6.32 | 8 | 39.8-39.8 cM | View Comparative Map | ||||
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CNNAU IR50/Tatsumimochi/Miyukimochi SSR QTL 2006 | BNL6.32 | 7 | 128.7-128.7 cM | View Comparative Map | ||||
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BNL6.32 | 8 | 67.1-67.1 cM | View Comparative Map | |||||
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CNZU IR1552/Azu RI QTL 2003 | BNL6.32 | 8 | 44.3-44.3 cM | View Comparative Map | ||||
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CNZU IR1552/Azu RI QTL 2004 | BNL6.32 | 8 | 44.3-44.3 cM | View Comparative Map | ||||
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Cornell IR64/Azu DH QTL 2001 | BNL6.32 | 8 | 60.9-60.9 cM | View Comparative Map | ||||
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JHPRC Rei/Yamd QTL 2002 | BNL6.32 | 8 | 0-0 cM | View Comparative Map | ||||
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TKU Integrated QTL 2002 | BNL6.32 | 8 | 30.5-30.5 cM | View Comparative Map | ||||
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TTU IR64/Orufi RI QTL 2003 | BNL6.32 | 8 | 151.4-151.4 cM | View Comparative Map | ||||
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Species | Type | Name | Assoc. Type |
---|---|---|---|
Oryza sativa | QTL | AQA009 | qtl_marker |
Oryza sativa | QTL | AQA014 | qtl_marker |
Oryza sativa | QTL | AQG004 | qtl_marker |
Oryza sativa | QTL | AQGH004 | qtl_marker |
Oryza sativa | QTL | AQGH017 | qtl_marker |
Oryza sativa | QTL | AQGH021 | qtl_marker |
Oryza sativa | QTL | AQGH034 | qtl_marker |
Oryza sativa | QTL | AQT032 | qtl_marker |
Oryza sativa | QTL | CQAP1 | qtl_marker |
Oryza sativa Indica Group | Primer | RM72_forward | primer_forward |
Oryza sativa Indica Group | Primer | RM72_reverse | primer_reverse |
Oryza sativa Indica Group | Genomic DNA | AF344086 | contained_in_sequence |
Oryza sativa Indica Group | Genomic DNA | AF344086 | source_sequence |