ID | 11367 |
---|---|
Name | RM549 |
Synonyms (0) | None. |
Type | SSR |
Species | Oryza sativa Japonica Group (Oryza sativa japonica) [ GR_tax:013684 ] |
Germplasm | |
Description | |
Tags () | None |
Marker Created: | |
---|---|
Marker Updated: | |
Internal Marker Accession: | RM549 |
Repeat Motif | (CCG)9 |
Anneal Temperature | 55 |
Expected PCR Product Size | 148 |
Sequence Source | AQ868278 |
Linkage Group | |
Remarks |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 6 | 6,976,491-6,976,638 bp | View Comparative Map | |||
|
||||||||
BNL6.32 | Chr. 6 | 6,976,500-6,976,691 bp | View Comparative Map | |||||
|
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Genetic | Cornell SSR 2001 | BNL6.32 | 6 | 42.7-42.7 cM | View Comparative Map | |||
|
||||||||
IRMI 2003 | BNL6.32 | 6 | 51.3-51.3 cM | View Comparative Map | ||||
|
||||||||
QTL | Cornell IR64/Azu DH QTL 2001 | BNL6.32 | 6 | 42.7-42.7 cM | View Comparative Map | |||
|
||||||||
NDSU EM93/SS18 BC QTL 2004 | BNL6.32 | 6 | 69.4-69.4 cM | View Comparative Map | ||||
|
Species | Type | Name | Assoc. Type |
---|---|---|---|
Oryza sativa | QTL | AQA023 | qtl_marker |
Oryza sativa | QTL | AQFB004 | qtl_marker |
Oryza sativa | QTL | AQGM011 | qtl_marker |
Oryza sativa Japonica Group | SSR | AUT19668 | equivalent_to |
Oryza sativa Japonica Group | Primer | RM549_forward | primer_forward |
Oryza sativa Japonica Group | Primer | RM549_reverse | primer_reverse |
Oryza sativa Japonica Group | GSS | AQ868278 | contained_in_sequence |
Oryza sativa Japonica Group | GSS | AQ868278 | source_sequence |