ID | 11306 |
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Name | RM574 |
Synonyms (0) | None. |
Type | SSR |
Species | Oryza sativa Japonica Group (Oryza sativa japonica) [ GR_tax:013684 ] |
Germplasm | |
Description | |
Tags () | None |
Marker Created: | |
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Marker Updated: | |
Internal Marker Accession: | RM574 |
Repeat Motif | (GA)11 |
Anneal Temperature | 55 |
Expected PCR Product Size | 155 |
Sequence Source | AQ954634 |
Linkage Group | |
Remarks |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 5 | 3,450,870-3,451,134 bp | View Comparative Map | |||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Genetic | Cornell SSR 2001 | BNL6.32 | 5 | 41-41 cM | View Comparative Map | |||
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QTL | CNHAU Zhen97/ H94 QTL 2005 | BNL6.32 | 5 | 60.1-60.1 cM | View Comparative Map | |||
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CNHAU Zhenshan 97/IRAT109 SSR QTL 2006 | BNL6.32 | 5 | 19-19 cM | View Comparative Map | ||||
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CNNAU IR50/Tatsumimochi/Miyukimochi SSR QTL 2006 | BNL6.32 | 5 | 20.7-20.7 cM | View Comparative Map | ||||
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Cornell IR64/Azu DH QTL 2001 | BNL6.32 | 5 | 41-41 cM | View Comparative Map | ||||
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Cornell IR64/IRG105 QTL 2003 | BNL6.32 | 5 | 54.1-54.1 cM | View Comparative Map | ||||
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NDSU EM93/SS18 BC QTL 2004 | BNL6.32 | 5 | 41.8-41.8 cM | View Comparative Map | ||||
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Species | Type | Name | Assoc. Type |
---|---|---|---|
Oryza sativa | QTL | AQA031 | qtl_marker |
Oryza sativa | QTL | AQA037 | qtl_marker |
Oryza sativa | QTL | AQB007 | qtl_marker |
Oryza sativa | QTL | AQJ009 | qtl_marker |
Oryza sativa Japonica Group | SSR | AUT17943 | equivalent_to |
Oryza sativa Japonica Group | Primer | RM574_forward | primer_forward |
Oryza sativa Japonica Group | Primer | RM574_reverse | primer_reverse |
Oryza sativa Japonica Group | GSS | AQ954634 | contained_in_sequence |
Oryza sativa Japonica Group | GSS | AQ954634 | source_sequence |