ID | 11271 |
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Name | RM280 |
Synonyms (1) | CT780 |
Type | SSR |
Species | Oryza sativa Indica Group (Oryza sativa indica) [ GR_tax:013682 ] |
Germplasm | |
Description | |
Tags () | None |
Marker Created: | |
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Marker Updated: | |
Internal Marker Accession: | RM280 |
Repeat Motif | (GA)16 |
Anneal Temperature | 55 |
Expected PCR Product Size | 155 |
Sequence Source | AF344106 |
Linkage Group | |
Remarks |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 4 | 34,989,558-34,989,727 bp | View Comparative Map | |||
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BNL6.32 | Chr. 4 | 34,989,603-34,989,777 bp | View Comparative Map | |||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Cornell SSR 2001 | BNL6.32 | 4 | 152.3-152.3 cM | View Comparative Map | |||
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IRMI 2003 | BNL6.32 | 4 | 128.9-128.9 cM | View Comparative Map | ||||
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QTL | CAU IRAT109/YUEFU QTL 2004 | BNL6.32 | 4 | 0-0 cM | View Comparative Map | |||
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CNHZAU Zhe97/Wuy2 QTL 2004 | BNL6.32 | 4 | 136.3-136.3 cM | View Comparative Map | ||||
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CNNAU IR50/Tatsumimochi/Miyukimochi SSR QTL 2006 | BNL6.32 | 4 | 136.8-136.8 cM | View Comparative Map | ||||
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Cornell IR64/Azu DH QTL 2001 | BNL6.32 | 4 | 152.3-152.3 cM | View Comparative Map | ||||
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Cornell IR64/IRG105 QTL 2003 | BNL6.32 | 4 | 190.8-190.8 cM | View Comparative Map | ||||
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Cornell Jef/Oruf BC QTL 2003 | BNL6.32 | 4 | 83.1-83.1 cM | View Comparative Map | ||||
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IRRI RD23/Olong F2 QTL 2003 | BNL6.32 | 4 | 102.6-102.6 cM | View Comparative Map | ||||
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LSU Caiapo/IRGC103544 QTL 2004 | BNL6.32 | 4 | 39-39 cM | View Comparative Map | ||||
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M202/IR50 UCD QTL 2003 | BNL6.32 | 4 | 116.2-116.2 cM | View Comparative Map | ||||
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TKU Integrated QTL 2002 | BNL6.32 | 4 | 111.7-111.7 cM | View Comparative Map | ||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
QTL | USMSU O sativa CL16/O.nivara 80470 SSR QTL 2006 | BNL6.32 | 4 | 128.9-128.9 cM | View Comparative Map | |||
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Species | Type | Name | Assoc. Type |
---|---|---|---|
Oryza sativa | QTL | AQEI057 | qtl_marker |
Oryza sativa | QTL | AQEI058 | qtl_marker |
Oryza sativa | QTL | AQEI059 | qtl_marker |
Oryza sativa | QTL | AQEI121 | qtl_marker |
Oryza sativa | QTL | AQGM019 | qtl_marker |
Oryza sativa Japonica Group | SSR | AUT17684 | equivalent_to |
Oryza sativa | QTL | EQC0013 | qtl_marker |
Oryza sativa Indica Group | Primer | RM280_forward | primer_forward |
Oryza sativa Indica Group | Primer | RM280_reverse | primer_reverse |
Oryza sativa Indica Group | Genomic DNA | AF344106 | contained_in_sequence |
Oryza sativa Indica Group | Genomic DNA | AF344106 | source_sequence |
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