ID | 11230 | ||||
---|---|---|---|---|---|
Name | RG348 | ||||
Synonyms (4) |
|
||||
Type | RFLP | ||||
Species | Oryza sativa (Oryza sativa) [ GR_tax:013681 ] | ||||
Germplasm | |||||
Description | |||||
Tags () | None |
Marker Created: | |
---|---|
Marker Updated: | |
Internal Marker Accession: | RG348 |
DNA Treatment | PstI-digested |
Source Type | Genomic |
Source Tissue | leaf |
Source Treatment | |
Vector | pUC8 |
Vector Antibiotic Resistance | Ampicillin |
Fragment Size | 1.4 |
Vector Excision Enzyme | PstI |
Vector Primers | M13 forward/M13 reverse |
Overgo1 | SOG1771 |
Overgo2 |
Gramene Literature | McCouch-S-R, Kochert-G, Yu-Z-H, Wang-Z-Y, Khush-G-S, Coffman-W-R, Tanksley-S-D, "Molecular mapping of rice chromosomes", Theoretical and applied genetics, 1988, vol. 76, pp. 815-829 |
---|---|
Gramene Diversity Rice Marker | 1342 |
GAGTGCTAAGGCGGGTTATTTTTCTTCTATGTACAAGAGATTTGGCAACTTATGCTATGTTTTTGGAGCGCTCAGAGCCT
TTTGGGGACATAGTAATCGAGATCTTAGAATAAAGGTTTGCATCGCACTGGTTTTAGAAGGAAGCTTAGTTGCAATCTTA
CTGATTTTTTCGTCATTATCAGTCCCACACCTCTTGAATTTACTAGTGCATATAATAGGTAAATGGTGGAGAATGGAAAA
CCATTCGTAAAGTCACTGCACTATGCATAGGAAATGCCAAATACTTCGGCGGTGGTATGAAGATCACTCCAACAGCTGAT
CCTTTCGGGGGTGACCTTGAAGTGCCTAAAAATCNTTTTTCCTTTATAGTTTTGAATTAAGCATTAAGAAAATTTAGCCN
TTGTTAAATTATGTTTTCATTTCCTAGGTCCGTTATCCTTCNAAATTCAAATGCATAATTCCTGCTCNACTCCTAANTGT
ATGAAGAACCCACCACNATGAATGTNTNTCCCCATAGGTAGGGNNCCCNAAGAACCTATGTTGCCCCTACTTAAACAGCG
ATTANGGCNNCTCGGTGGTCCCCAACCNCCTTTTTTGGTTNTCANTCCCCGAANAAAACNGTTNNCCCCGGNTTGNTGAC
NANNCCAATTAAAATTTC
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 3 | 1,449,758-1,450,227 bp | View Comparative Map | |||
|
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Genetic | Cornell SSR 2001 | BNL6.32 | 3 | 13-13 cM | View Comparative Map | |||
|
||||||||
QTL | CIRAD IR64/Azu DH QTL 2003 | BNL6.32 | 3 | 7.3-7.3 cM | View Comparative Map | |||
|
||||||||
CNRRI Tes/CB QTL 1997 | BNL6.32 | 3 | 6.5-6.5 cM | View Comparative Map | ||||
|
||||||||
CNRRI Tes/CB QTL 1998 | BNL6.32 | 3 | 4.6-4.6 cM | View Comparative Map | ||||
|
||||||||
CNRRI Wai/CB QTL 1996 | BNL6.32 | 3 | 38.4-38.4 cM | View Comparative Map | ||||
|
||||||||
CNZU IR1552/Azu RI QTL 2003 | BNL6.32 | 3 | 0-0 cM | View Comparative Map | ||||
|
||||||||
CNZU IR1552/Azu RI QTL 2004 | BNL6.32 | 3 | 0-0 cM | View Comparative Map | ||||
|
||||||||
IRRI IR622/IR600 QTL 2003 | BNL6.32 | 3 | 33.2-33.2 cM | View Comparative Map | ||||
|
||||||||
IRRI IR64/Azu DH QTL 2003 | BNL6.32 | 3 | 4.4-4.4 cM | View Comparative Map | ||||
|
||||||||
IRRI Lem/Teq RI QTL 2001 | BNL6.32 | 3 | 7.3-7.3 cM | View Comparative Map | ||||
|
||||||||
IRRI Mor/CO39 QTL 1994 | BNL6.32 | 3 | 3.5-3.5 cM | View Comparative Map | ||||
|
||||||||
TAMU Lem/Teq RI QTL 1995 | BNL6.32 | 3a | 11-11 cM | View Comparative Map | ||||
|
||||||||
Zejiang IR64/Azu DH QTL 2001 | BNL6.32 | 3 | 8.7-8.7 cM | View Comparative Map | ||||
|
||||||||
Zhejian IR1552/Azu RI QTL 2001 | BNL6.32 | 3 | 0-0 cM | View Comparative Map | ||||
|
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Genetic | Paterson 2003 | BNL6.32 | C | 110.8-110.8 cM | View Comparative Map | |||
|
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Genetic | Cornell RFLP 1994 | BNL6.32 | 3 | 2.4-2.4 cM | View Comparative Map | |||
|
||||||||
Cornell RFLP 2001 | BNL6.32 | 3 | 6.8-6.8 cM | View Comparative Map | ||||
|
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Genetic | Huazhong RFLP 1997 | BNL6.32 | 3 | 7.3-7.3 cM | View Comparative Map | |||
|