ID | 11198 |
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Name | RM218 |
Synonyms (1) | CT125 |
Type | SSR |
Species | Oryza sativa Indica Group (Oryza sativa indica) [ GR_tax:013682 ] |
Germplasm | |
Description | |
Tags () | None |
Marker Created: | |
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Marker Updated: | |
Internal Marker Accession: | RM218 |
Repeat Motif | (TC)24ACT5(GT)11 |
Anneal Temperature | 55 |
Expected PCR Product Size | 148 |
Sequence Source | AF344039 |
Linkage Group | |
Remarks |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 3 | 8,405,368-8,405,516 bp | View Comparative Map | |||
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BNL6.32 | Chr. 3 | 8,405,371-8,405,752 bp | View Comparative Map | |||||
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BNL6.32 | Chr. 3 | 8,405,371-8,405,752 bp | View Comparative Map | |||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Cornell SSR 2001 | BNL6.32 | 3 | 67.8-67.8 cM | View Comparative Map | |||
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IGCN 1998 | BNL6.32 | 3 | 64-64 cM | View Comparative Map | ||||
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IRMI 2003 | BNL6.32 | 3 | 40.3-40.3 cM | View Comparative Map | ||||
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KRGRP 1998 | BNL6.32 | 3 | 53.7-53.7 cM | View Comparative Map | ||||
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QTL | CNHAU Zhen97/ H94 QTL 2005 | BNL6.32 | 3 | 35.5-35.5 cM | View Comparative Map | |||
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CNHZAU Zhe97/Wuy2 QTL 2004 | BNL6.32 | 3 | 52.1-52.1 cM | View Comparative Map | ||||
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CNRRI Zh97B/Mil46 RI QTL 2002 | BNL6.32 | 3 | 5.9-5.9 cM | View Comparative Map | ||||
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Cornell IR64/Azu DH QTL 2001 | BNL6.32 | 3 | 67.8-67.8 cM | View Comparative Map | ||||
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IGCN ZYQ18/JX17 DH QTL 1998 | BNL6.32 | 3 | 64-64 cM | View Comparative Map | ||||
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IRRI IR622/IR600 QTL 2003 | BNL6.32 | 3 | 84.2-84.2 cM | View Comparative Map | ||||
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IRRI Lem/Teq RI QTL 2001 | BNL6.32 | 3 | 72.6-72.6 cM | View Comparative Map | ||||
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JUT Akihi/IRAT109 QTL 2004 | BNL6.32 | 3 | 40.53-40.53 cM | View Comparative Map | ||||
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KRGRP Mil23/Gih QTL 1998 | BNL6.32 | 3 | 53.7-53.7 cM | View Comparative Map | ||||
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TKU Integrated QTL 2002 | BNL6.32 | 3 | 0-0 cM | View Comparative Map | ||||
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Species | Type | Name | Assoc. Type |
---|---|---|---|
Oryza sativa | QTL | AQAK026 | qtl_marker |
Oryza sativa | QTL | AQCU106 | qtl_marker |
Oryza sativa | QTL | AQEI007 | qtl_marker |
Oryza sativa | QTL | AQEI008 | qtl_marker |
Oryza sativa | QTL | AQEI052 | qtl_marker |
Oryza sativa | QTL | AQEI065 | qtl_marker |
Oryza sativa | QTL | AQEI131 | qtl_marker |
Oryza sativa | QTL | AQFJ061 | qtl_marker |
Oryza sativa | QTL | AQFW129 | qtl_marker |
Oryza sativa | QTL | AQGA007 | qtl_marker |
Oryza sativa | QTL | AQGP038 | qtl_marker |
Oryza sativa | QTL | AQGP045 | qtl_marker |
Oryza sativa Japonica Group | SSR | AUT14694 | equivalent_to |
Oryza sativa Japonica Group | SSR | AUT14695 | equivalent_to |
Oryza sativa Indica Group | Primer | RM218_forward | primer_forward |
Oryza sativa Indica Group | Primer | RM218_reverse | primer_reverse |
Oryza sativa Indica Group | Genomic DNA | AF344039 | contained_in_sequence |
Oryza sativa Indica Group | Genomic DNA | AF344039 | source_sequence |