ID | 11197 | ||
---|---|---|---|
Name | OSR13 | ||
Synonyms (2) |
|
||
Type | SSR | ||
Species | Oryza sativa (Oryza sativa) [ GR_tax:013681 ] | ||
Germplasm | |||
Description | |||
Tags () | None |
Marker Created: | |
---|---|
Marker Updated: | |
Internal Marker Accession: | OSR13 |
Repeat Motif | (GA)n |
Anneal Temperature | 55 |
Expected PCR Product Size | 0 |
Sequence Source | D46417 |
Linkage Group | |
Remarks |
Gramene Literature | Akagi-H, Yokozeki-Y, Inagaki-A, Fujimura-T, "Microsatellite DNA markers for rice chromosomes", Theoretical and applied genetics, 1996, vol. 93, pp. 1071-1077 |
---|---|
Gramene Diversity Rice Marker | 84 |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 3 | 7,125,911-7,126,131 bp | View Comparative Map | |||
|
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Genetic | Cornell SSR 2001 | BNL6.32 | 3 | 53.1-53.1 cM | View Comparative Map | |||
|
||||||||
QTL | AGEBC KDM105/CT999 RI QTL 2000 | BNL6.32 | 3b | 17.9-17.9 cM | View Comparative Map | |||
|
||||||||
Cornell IR64/Azu DH QTL 2001 | BNL6.32 | 3 | 53.1-53.1 cM | View Comparative Map | ||||
|
||||||||
IRRI RD23/Olong F2 QTL 2003 | BNL6.32 | 3 | 44-44 cM | View Comparative Map | ||||
|
Species | Type | Name | Assoc. Type |
---|---|---|---|
Oryza sativa | QTL | AQAM003 | qtl_marker |
Oryza sativa | QTL | AQAM004 | qtl_marker |
Oryza sativa | QTL | AQAM005 | qtl_marker |
Oryza sativa Japonica Group | SSR | AUT14643 | equivalent_to |
Oryza sativa | Primer | OSR13_forward | primer_forward |
Oryza sativa | Primer | OSR13_reverse | primer_reverse |
Oryza sativa Japonica Group | EST | D46417 | source_sequence |