ID | 11193 |
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Name | RG100 |
Synonyms (1) | RG100(A) |
Type | RFLP |
Species | Oryza sativa (Oryza sativa) [ GR_tax:013681 ] |
Germplasm | |
Description | |
Tags () | None |
Marker Created: | |
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Marker Updated: | |
Internal Marker Accession: | RG100 |
DNA Treatment | PstI-digested |
Source Type | Genomic |
Source Tissue | leaf |
Source Treatment | |
Vector | pUC8 |
Vector Antibiotic Resistance | Ampicillin |
Fragment Size | 0.9 |
Vector Excision Enzyme | PstI |
Vector Primers | M13 forward/M13 reverse |
Overgo1 | |
Overgo2 |
Gramene Literature | McCouch-S-R, Kochert-G, Yu-Z-H, Wang-Z-Y, Khush-G-S, Coffman-W-R, Tanksley-S-D, "Molecular mapping of rice chromosomes", Theoretical and applied genetics, 1988, vol. 76, pp. 815-829 |
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Gramene Diversity Rice Marker | 434 |
Gramene Diversity Rice Marker | 1307 |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 3 | 5,181,383-5,181,678 bp | View Comparative Map | |||
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BNL6.32 | Chr. 3 | 5,181,853-5,182,350 bp | View Comparative Map | |||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Cornell SSR 2001 | BNL6.32 | 3 | 37.2-37.2 cM | View Comparative Map | |||
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KRGRP 1998 | BNL6.32 | 3 | 37-37 cM | View Comparative Map | ||||
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QTL | CIRAD IR64/Azu DH QTL 2003 | BNL6.32 | 3 | 35-35 cM | View Comparative Map | |||
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Cornell IR64/Azu DH QTL 2001 | BNL6.32 | 3 | 37.2-37.2 cM | View Comparative Map | ||||
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IRRI IR64/Azu DH QTL 2003 | BNL6.32 | 3 | 20.4-20.4 cM | View Comparative Map | ||||
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IRRI Lem/Teq RI QTL 2001 | BNL6.32 | 3 | 36-36 cM | View Comparative Map | ||||
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IRRI Pal/IR42 F2 QTL 1995 | BNL6.32 | 3a | 0-0 cM | View Comparative Map | ||||
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KRGRP Mil23/Gih QTL 1998 | BNL6.32 | 3 | 37-37 cM | View Comparative Map | ||||
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Zejiang IR64/Azu DH QTL 2001 | BNL6.32 | 3 | 34.2-34.2 cM | View Comparative Map | ||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | IGCN sativa/eichingeri RFLP | BNL6.32 | 3 | 36.5-36.5 cM | View Comparative Map | |||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Cornell RFLP 1994 | BNL6.32 | 3 | 15.2-15.2 cM | View Comparative Map | |||
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Cornell RFLP 2001 | BNL6.32 | 3 | 19.6-19.6 cM | View Comparative Map | ||||
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Species | Type | Name | Assoc. Type |
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Oryza sativa | QTL | AQAS003 | qtl_marker |
Oryza sativa | QTL | AQAS004 | qtl_marker |
Oryza sativa | QTL | AQAS008 | qtl_marker |
Oryza sativa | QTL | AQBA010 | qtl_marker |
Oryza sativa | QTL | AQBA011 | qtl_marker |
Oryza sativa | QTL | AQBA014 | qtl_marker |
Oryza sativa | QTL | AQBX006 | qtl_marker |
Oryza sativa | QTL | AQBX025 | qtl_marker |
Oryza sativa | QTL | AQCN005 | qtl_marker |
Oryza sativa | QTL | AQCU072 | qtl_marker |
Oryza sativa | QTL | AQCU106 | qtl_marker |
Oryza sativa | QTL | AQCU184 | qtl_marker |
Oryza sativa | QTL | AQFW129 | qtl_marker |
Oryza sativa | QTL | AQW007 | qtl_marker |
Oryza sativa | QTL | DQE17 | qtl_marker |
Oryza sativa Indica Group | Genomic DNA | G73748 | related_sequence |
Oryza sativa Indica Group | GSS | AQ074216 | related_sequence |
Oryza sativa Indica Group | Genomic DNA | G73748 | contained_in_sequence |
RG100 78-79 Autorad: Survey blot of the probe RG100 for the 78-79 population |