ID | 11168 |
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Name | RM498 |
Synonyms (0) | None. |
Type | SSR |
Species | Oryza sativa Japonica Group (Oryza sativa japonica) [ GR_tax:013684 ] |
Germplasm | |
Description | |
Tags () | None |
Marker Created: | |
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Marker Updated: | |
Internal Marker Accession: | RM498 |
Repeat Motif | (CA)10 |
Anneal Temperature | 55 |
Expected PCR Product Size | 213 |
Sequence Source | AQ574558 |
Linkage Group | |
Remarks |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 2 | 35,391,758-35,392,037 bp | View Comparative Map | |||
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BNL6.32 | Chr. 2 | 35,391,796-35,392,008 bp | View Comparative Map | |||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Genetic | Cornell SSR 2001 | BNL6.32 | 2 | 194.6-194.6 cM | View Comparative Map | |||
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IRMI 2003 | BNL6.32 | 2 | 156.3-156.3 cM | View Comparative Map | ||||
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QTL | Cornell IR64/Azu DH QTL 2001 | BNL6.32 | 2 | 194.6-194.6 cM | View Comparative Map | |||
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Species | Type | Name | Assoc. Type |
---|---|---|---|
Oryza sativa | QTL | AQA029 | qtl_marker |
Oryza sativa Japonica Group | SSR | AUT14200 | equivalent_to |
Oryza sativa | QTL | CQAE1 | qtl_marker |
Oryza sativa | QTL | CQAE8 | qtl_marker |
Oryza sativa Japonica Group | Primer | RM498_forward | primer_forward |
Oryza sativa Japonica Group | Primer | RM498_reverse | primer_reverse |
Oryza sativa Japonica Group | GSS | AQ574558 | contained_in_sequence |
Oryza sativa Japonica Group | GSS | AQ574558 | source_sequence |