ID | 11160 |
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Name | RG256 |
Synonyms (1) | RG256X |
Type | RFLP |
Species | Oryza sativa (Oryza sativa) [ GR_tax:013681 ] |
Germplasm | |
Description | |
Tags () | None |
Marker Created: | |
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Marker Updated: | |
Internal Marker Accession: | RG256 |
DNA Treatment | PstI-digested |
Source Type | Genomic |
Source Tissue | leaf |
Source Treatment | |
Vector | pUC8 |
Vector Antibiotic Resistance | Ampicillin |
Fragment Size | 1.7 |
Vector Excision Enzyme | PstI |
Vector Primers | M13 forward/M13 reverse |
Overgo1 | |
Overgo2 |
Gramene Literature | McCouch-S-R, Kochert-G, Yu-Z-H, Wang-Z-Y, Khush-G-S, Coffman-W-R, Tanksley-S-D, "Molecular mapping of rice chromosomes", Theoretical and applied genetics, 1988, vol. 76, pp. 815-829 |
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Gramene Diversity Rice Marker | 485 |
Gramene Diversity Rice Marker | 1336 |
GGTTTTGCCAGTGGAAGCCTTGATGAAGATGCATCTTCTGTCAGGCTTTTTGTTCAACGGGGACTGGAAGTGTTTGTTGC
GCAGTCTTATAGCAAAAACCTTGGTTTATATGCAGAAAGAATTGGAGCAATAAATGTTGTCTGCTCAACACCTGAAGTCG
CAAACAGGTGATACTTTAATCTGAATGATTGCCTTCGTAGTCGAATTGTTCATTTCTATCCAGTTATTGCAGCGAATGTT
AATAATAGATTATTCTGTTTAGTGGGTAATATGGACCAACCTCTTATTGATGTGCAAAGCAACTTGATTTTTCATGGTAG
GTTAACAAGACTTCTAAGCAAATTTCATCCAGGCNAAAAATGTTGTAAATTCTTGGAAATTANTGTTATGTTCAGATTCA
ANAGACACTAATTTTTACTCCCAGAAAAANAAACCNCCNGCCACAATNATTNGTCTCAACCCNAACCAACCAANCCNNNG
AATTTANGTTTACCCTTNACCAACCCCCCCNNAANAAATTTNTACTTCCAATTTCNC
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 2 | 33,938,697-33,939,159 bp | View Comparative Map | |||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Cornell SSR 2001 | BNL6.32 | 2 | 179.8-179.8 cM | View Comparative Map | |||
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IGCN 1998 | BNL6.32 | 2 | 43.6-43.6 cM | View Comparative Map | ||||
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TTU IRIR 2000 | BNL6.32 | 2 | 254.9-254.9 cM | View Comparative Map | ||||
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QTL | Aberdeen Bala/Azu QTL 2002 | BNL6.32 | 2 | 196-196 cM | View Comparative Map | |||
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CIRAD IR64/Azu DH QTL 2003 | BNL6.32 | 2 | 190.4-190.4 cM | View Comparative Map | ||||
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CNRRI Tes/CB QTL 1997 | BNL6.32 | 2 | 0-0 cM | View Comparative Map | ||||
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CNRRI Wai/CB QTL 1996 | BNL6.32 | 2 | 15.8-15.8 cM | View Comparative Map | ||||
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Cornell IR64/Azu DH QTL 2001 | BNL6.32 | 2 | 179.8-179.8 cM | View Comparative Map | ||||
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Cornell V20A/Oruf QTL 1998 | BNL6.32 | 2 | 110.9-110.9 cM | View Comparative Map | ||||
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IGCAS Jas85/Lem F2 QTL 2000 | BNL6.32 | 2 | 155.8-155.8 cM | View Comparative Map | ||||
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IGCN ZYQ18/JX17 DH QTL 1998 | BNL6.32 | 2 | 43.6-43.6 cM | View Comparative Map | ||||
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IRRI IR622/IR600 QTL 2003 | BNL6.32 | 2 | 51.9-51.9 cM | View Comparative Map | ||||
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IRRI IR64/Azu DH QTL 2003 | BNL6.32 | 2 | 129.3-129.3 cM | View Comparative Map | ||||
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IRRI Lem/Teq RI QTL 2001 | BNL6.32 | 2 | 231.5-231.5 cM | View Comparative Map | ||||
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IRRI Pal/IR42 F2 QTL 1995 | BNL6.32 | 2 | 8.6-8.6 cM | View Comparative Map | ||||
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MU CT9993/IR6226 QTL 2004 | BNL6.32 | 2 | 163-163 cM | View Comparative Map | ||||
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TAMU Lem/Teq RI QTL 1995 | BNL6.32 | 2 | 23-23 cM | View Comparative Map | ||||
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TTU IR58821/IR52561 QTL 2002 | BNL6.32 | 2 | 254.9-254.9 cM | View Comparative Map | ||||
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UCD Lab/Bla QTL 1998 | BNL6.32 | 2 | 187-187 cM | View Comparative Map | ||||
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UKUW Bala/Azu QTL 1997 | BNL6.32 | 2c | 0-0 cM | View Comparative Map | ||||
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Zejiang IR64/Azu DH QTL 2001 | BNL6.32 | 2 | 171-171 cM | View Comparative Map | ||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Cornell RFLP 1994 | BNL6.32 | 2 | 156.4-156.4 cM | View Comparative Map | |||
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Cornell RFLP 2001 | BNL6.32 | 2 | 140.7-140.7 cM | View Comparative Map | ||||
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RG256 SL Autorad: Survey blot of the probe RG256 for the BS125/2/BS125/WLO2 population |