ID | 11154 |
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Name | RM240 |
Synonyms (1) | CT388 |
Type | SSR |
Species | Oryza sativa Indica Group (Oryza sativa indica) [ GR_tax:013682 ] |
Germplasm | |
Description | |
Tags () | None |
Marker Created: | |
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Marker Updated: | |
Internal Marker Accession: | RM240 |
Repeat Motif | (CT)21 |
Anneal Temperature | 55 |
Expected PCR Product Size | 132 |
Sequence Source | AF344060 |
Linkage Group | |
Remarks |
Gramene Literature | Chen-X, Temnykh-S, Xu-Y, Cho-Y-G, McCouch-S-R, "Development of a microsatellite framework map providing genome-wide coverage in rice (Oryza sativa L.)", Theoretical and applied genetics, 1997, vol. 95, pp. 553-567 |
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Gramene Diversity Rice Marker | 207 |
Gramene Diversity Rice Marker | 1246 |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 2 | 31,497,147-31,497,256 bp | View Comparative Map | |||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Cornell SSR 2001 | BNL6.32 | 2 | 158-158 cM | View Comparative Map | |||
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IGCN 1998 | BNL6.32 | 2 | 47.4-47.4 cM | View Comparative Map | ||||
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IRMI 2003 | BNL6.32 | 2 | 135.5-135.5 cM | View Comparative Map | ||||
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QTL | Brazil BG90-2/RS16 QTL 2002 | BNL6.32 | 2 | 157.5-157.5 cM | View Comparative Map | |||
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CNHAU Zhenshan 97/IRAT109 SSR QTL 2006 | BNL6.32 | 2 | 150.8-150.8 cM | View Comparative Map | ||||
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CNHZAU Zh97/Ming63 RI QTL 2002 | BNL6.32 | 2b | 0-0 cM | View Comparative Map | ||||
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CNHZAU Zhe97/Wuy2 QTL 2004 | BNL6.32 | 2 | 179.9-179.9 cM | View Comparative Map | ||||
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CNNAU IR50/Tatsumimochi/Miyukimochi SSR QTL 2006 | BNL6.32 | 2 | 178-178 cM | View Comparative Map | ||||
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CNRRI XeiB/Mil46 RI QTL 2002 | BNL6.32 | 2 | 173.4-173.4 cM | View Comparative Map | ||||
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CNRRI Zh97B/Mil46 RI QTL 2002 | BNL6.32 | 2 | 146-146 cM | View Comparative Map | ||||
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Cornell IR64/Azu DH QTL 2001 | BNL6.32 | 2 | 158-158 cM | View Comparative Map | ||||
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Cornell IR64/IRG105 QTL 2003 | BNL6.32 | 2 | 174.6-182.9 cM | View Comparative Map | ||||
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Cornell Jef/Oruf BC QTL 2003 | BNL6.32 | 2 | 133.5-133.5 cM | View Comparative Map | ||||
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Cornell V20A/Oruf QTL 1998 | BNL6.32 | 2 | 100.3-110.9 cM | View Comparative Map | ||||
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IGCAS ZYQ8/JX17 DH QTL 2000 | BNL6.32 | 2 | 170.1-170.1 cM | View Comparative Map | ||||
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IGCN ZYQ18/JX17 DH QTL 1998 | BNL6.32 | 2 | 47.4-47.4 cM | View Comparative Map | ||||
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INDIR IR58025/O. rufipogon BC SSR QTL 2005 | BNL6.32 | 2 | 202.3-202.3 cM | View Comparative Map | ||||
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IRRI IR622/IR600 QTL 2003 | BNL6.32 | 2 | 26.1-26.1 cM | View Comparative Map | ||||
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IRRI RD23/Olong F2 QTL 2003 | BNL6.32 | 2 | 147.4-147.4 cM | View Comparative Map | ||||
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LSU Caiapo/IRGC103544 QTL 2004 | BNL6.32 | 2 | 104.9-104.9 cM | View Comparative Map | ||||
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M202/IR50 UCD QTL 2003 | BNL6.32 | 2 | 114.5-114.5 cM | View Comparative Map | ||||
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TKU Integrated QTL 2002 | BNL6.32 | 2 | 123.8-123.8 cM | View Comparative Map | ||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | IGCN sativa/eichingeri RFLP | BNL6.32 | 2 | 41.2-41.2 cM | View Comparative Map | |||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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QTL | USMSU O sativa CL16/O.nivara 80470 SSR QTL 2006 | BNL6.32 | 2 | 135.5-135.5 cM | View Comparative Map | |||
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