ID | 11149 |
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Name | RM525 |
Synonyms (0) | None. |
Type | SSR |
Species | Oryza sativa Japonica Group (Oryza sativa japonica) [ GR_tax:013684 ] |
Germplasm | |
Description | |
Tags () | None |
Marker Created: | |
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Marker Updated: | |
Internal Marker Accession: | RM525 |
Repeat Motif | (AAG)12 |
Anneal Temperature | 55 |
Expected PCR Product Size | 131 |
Sequence Source | AQ794433 |
Linkage Group | |
Remarks |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 2 | 28,267,534-28,267,730 bp | View Comparative Map | |||
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BNL6.32 | Chr. 2 | 28,267,604-28,267,734 bp | View Comparative Map | |||||
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BNL6.32 | Chr. 2 | 28,267,608-28,267,732 bp | View Comparative Map | |||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Genetic | Cornell SSR 2001 | BNL6.32 | 2 | 143.7-143.7 cM | View Comparative Map | |||
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IRMI 2003 | BNL6.32 | 2 | 118.1-118.1 cM | View Comparative Map | ||||
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QTL | Cornell IR64/Azu DH QTL 2001 | BNL6.32 | 2 | 143.7-143.7 cM | View Comparative Map | |||
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Species | Type | Name | Assoc. Type |
---|---|---|---|
Oryza sativa | QTL | AQA028 | qtl_marker |
Oryza sativa | QTL | AQA041 | qtl_marker |
Oryza sativa | QTL | AQB003 | qtl_marker |
Oryza sativa | QTL | AQB013 | qtl_marker |
Oryza sativa | QTL | AQGP054 | qtl_marker |
Oryza sativa Japonica Group | SSR | AUT13796 | equivalent_to |
Oryza sativa Japonica Group | SSR | MRG4631.RGP4631 | equivalent_to |
Oryza sativa Japonica Group | Primer | RM525_forward | primer_forward |
Oryza sativa Japonica Group | Primer | RM525_reverse | primer_reverse |
Oryza sativa Japonica Group | GSS | AQ794433 | contained_in_sequence |
Oryza sativa Japonica Group | GSS | AQ794433 | source_sequence |