ID | 11140 |
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Name | RG171 |
Synonyms (1) | V141 |
Type | RFLP |
Species | Oryza sativa (Oryza sativa) [ GR_tax:013681 ] |
Germplasm | |
Description | |
Tags () | None |
Marker Created: | |
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Marker Updated: | |
Internal Marker Accession: | RG171 |
DNA Treatment | PstI-digested |
Source Type | Genomic |
Source Tissue | leaf |
Source Treatment | |
Vector | pUC8 |
Vector Antibiotic Resistance | Ampicillin |
Fragment Size | 0.7 |
Vector Excision Enzyme | PstI |
Vector Primers | M13 forward/M13 reverse |
Overgo1 | |
Overgo2 |
Gramene Literature | McCouch-S-R, Kochert-G, Yu-Z-H, Wang-Z-Y, Khush-G-S, Coffman-W-R, Tanksley-S-D, "Molecular mapping of rice chromosomes", Theoretical and applied genetics, 1988, vol. 76, pp. 815-829 |
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Gramene Diversity Rice Marker | 479 |
Gramene Diversity Rice Marker | 738 |
Gramene Diversity Rice Marker | 1321 |
TGCCGGCCAGAAGGTAAATTTTGGCGATGTTTATTTTTCAGTGGTAATTCAGTCAATTTATTGACAGGTTTGCTGTCTTC
TTTTAAGCAGTACACCTGTTGGATAAGTGCTAGAATTATTTTGTGACACGTCCAGTACGCAAGTCCATGTCTTACACAGT
TATCTACACTACTGTTCAGGTGCTTGCGTCGCTTATAATCAGACTGGCACTGGCAGAAACATTCTGTCTGAACTGTGGCA
TATTAGCTCTAGATGAGCCGACCACCAATCTAGATGGGCCTAATGCAGAGAGCCTTGCTGGTGCCCTTTTGAGGTATTCC
TTTTGGCAACTACAGATTTACTACTTAATTGTTATCACCCGGAGCTTCCACCCNAACTGTGTGTGCGCCTGTCTGTCTTT
CCGACACAGAATAATGGAGAGCAGGAAGGGCAGGAGACTTCCAGTTGATGGNGATCACCATGACGAGAGGTTGCNCAGCT
AATTGGGCAANGGAGCCCCCGNGAANACTACGGGNNCCANGGTGAAGAAANGGGNCGCATTTCCTAAAGGATCGCCTCCN
CGGGGGCNCNNCCCTGGAACCGGGCAATGGGAAAAGGGAAAGNCCCGGGAANTNCCNCAACCCAAAAGGGGGGAAAAANC
NGGGGGAANGG
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 2 | 17,484,665-17,485,139 bp | View Comparative Map | |||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Cornell SSR 2001 | BNL6.32 | 2 | 70.2-70.2 cM | View Comparative Map | |||
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IGCN 1998 | BNL6.32 | 2 | 139.3-139.3 cM | View Comparative Map | ||||
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JRGP RFLP 2000 | BNL6.32 | 2 | 57.9-57.9 cM | View Comparative Map | ||||
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TTU CTIR 2000 | BNL6.32 | 2 | 60.3-60.3 cM | View Comparative Map | ||||
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TTU IRIR 2000 | BNL6.32 | 2 | 92.2-92.2 cM | View Comparative Map | ||||
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QTL | Aberdeen Bala/Azu QTL 2002 | BNL6.32 | 2 | 54.5-54.5 cM | View Comparative Map | |||
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CIRAD IR64/Azu DH QTL 2003 | BNL6.32 | 2 | 66.7-66.7 cM | View Comparative Map | ||||
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CNHZAU Pei/8902 QTL 1999 | BNL6.32 | 2 | 91.2-91.2 cM | View Comparative Map | ||||
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CNRRI Tes/CB QTL 1997 | BNL6.32 | 2 | 102.2-102.2 cM | View Comparative Map | ||||
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CNRRI Tes/CB QTL 1998 | BNL6.32 | 2b | 0-0 cM | View Comparative Map | ||||
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CNRRI Wai/CB QTL 1996 | BNL6.32 | 2 | 110.7-110.7 cM | View Comparative Map | ||||
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CNRRI Zh97B/Mil46 RI QTL 2002 | BNL6.32 | 2 | 71.1-71.1 cM | View Comparative Map | ||||
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Cornell IR64/Azu DH QTL 2001 | BNL6.32 | 2 | 70.2-70.2 cM | View Comparative Map | ||||
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CTIR CT9993/IR6226 QTL 2000 | BNL6.32 | 2 | 60.3-60.3 cM | View Comparative Map | ||||
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IGCAS Jas85/Lem F2 QTL 2000 | BNL6.32 | 2 | 38.8-38.8 cM | View Comparative Map | ||||
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IGCAS ZYQ8/JX17 DH QTL 2000 | BNL6.32 | 2 | 92-92 cM | View Comparative Map | ||||
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IGCN ZYQ18/JX17 DH QTL 1998 | BNL6.32 | 2 | 139.3-139.3 cM | View Comparative Map | ||||
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IGCN ZYQ8/JX17 RI QTL 2001 | BNL6.32 | 2 | 0-115.2 cM | View Comparative Map | ||||
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IRRI IR622/IR600 QTL 2003 | BNL6.32 | 2 | 18.1-18.1 cM | View Comparative Map | ||||
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IRRI IR64/Azu DH QTL 2003 | BNL6.32 | 2 | 25.8-25.8 cM | View Comparative Map | ||||
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IRRI Pal/IR42 F2 QTL 1995 | BNL6.32 | 2 | 184.8-184.8 cM | View Comparative Map | ||||
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JRGP Nip/Kas F2 QTL 2000 | BNL6.32 | 2 | 57.9-57.9 cM | View Comparative Map | ||||
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MU CT9993/IR6226 QTL 2004 | BNL6.32 | 2 | 60.4-60.4 cM | View Comparative Map | ||||
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TAMU Lem/Teq RI QTL 1995 | BNL6.32 | 2 | 131-131 cM | View Comparative Map | ||||
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TNCGEB CT9993/IR6226 QTL 2004 | BNL6.32 | 2 | 55.4-55.4 cM | View Comparative Map | ||||
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TTU IR58821/IR52561 QTL 2002 | BNL6.32 | 2 | 92.2-92.2 cM | View Comparative Map | ||||
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UCD Lab/Bla QTL 1998 | BNL6.32 | 2 | 90-90 cM | View Comparative Map | ||||
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UKUW Bala/Azu QTL 1997 | BNL6.32 | 2b | 0-0 cM | View Comparative Map | ||||
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Zejiang IR64/Azu DH QTL 2001 | BNL6.32 | 2 | 42.2-42.2 cM | View Comparative Map | ||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | IGCN sativa/eichingeri RFLP | BNL6.32 | 2 | 110.7-110.7 cM | View Comparative Map | |||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Cornell RFLP 1994 | BNL6.32 | 2 | 62.5-62.5 cM | View Comparative Map | |||
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Cornell RFLP 2001 | BNL6.32 | 2 | 69.1-69.1 cM | View Comparative Map | ||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Huazhong RFLP 1997 | BNL6.32 | 2 | 66-66 cM | View Comparative Map | |||
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RG171 78-79 Autorad: Survey blot of the probe RG171 for the 78-79 population | |
RG171 SL Autorad: Survey blot of the probe RG171 for the BS125/2/BS125/WLO2 population |