ID | 11103 | ||||
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Name | RM294 | ||||
Synonyms (3) |
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Type | SSR | ||||
Species | Oryza sativa Indica Group (Oryza sativa indica) [ GR_tax:013682 ] | ||||
Germplasm | |||||
Description | |||||
Tags () | None |
Marker Created: | |
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Marker Updated: | |
Internal Marker Accession: | RM294 |
Repeat Motif | {(GT)3T2AGGGACA}2 |
Anneal Temperature | 55 |
Expected PCR Product Size | 173 |
Sequence Source | AF344120 |
Linkage Group | |
Remarks |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 1 | 10,076,915-10,077,088 bp | View Comparative Map | |||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Cornell SSR 2001 | BNL6.32 | 1 | 78.4-83.5 cM | View Comparative Map | |||
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BNL6.32 | 10 | 87.1-87.1 cM | View Comparative Map | |||||
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QTL | CNHAU Zhen97/ H94 QTL 2005 | BNL6.32 | 1 | 95.9-95.9 cM | View Comparative Map | |||
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CNHZAU Zh97/Ming63 RI QTL 2002 | BNL6.32 | 1 | 121.1-121.1 cM | View Comparative Map | ||||
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CNHZAU Zhe97/Wuy2 QTL 2004 | BNL6.32 | 1 | 106.9-106.9 cM | View Comparative Map | ||||
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CNNAU IR50/Tatsumimochi/Miyukimochi SSR QTL 2006 | BNL6.32 | 1 | 109.4-109.4 cM | View Comparative Map | ||||
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BNL6.32 | 8 | 121-121 cM | View Comparative Map | |||||
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CNRRI XeiB/Mil46 RI QTL 2002 | BNL6.32 | 1 | 103-103 cM | View Comparative Map | ||||
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BNL6.32 | 1 | 126.5-126.5 cM | View Comparative Map | |||||
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CNRRI Zh97B/Mil46 RI QTL 2002 | BNL6.32 | 1 | 93.1-93.1 cM | View Comparative Map | ||||
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BNL6.32 | 1 | 101-101 cM | View Comparative Map | |||||
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CNYU Bal/Nan//Bal BC1 QTL 2001 | BNL6.32 | 1a | 76.4-76.4 cM | View Comparative Map | ||||
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Cornell IR64/Azu DH QTL 2001 | BNL6.32 | 1 | 80.95-80.95 cM | View Comparative Map | ||||
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BNL6.32 | 10 | 87.1-87.1 cM | View Comparative Map | |||||
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M202/IR50 UCD QTL 2003 | BNL6.32 | 1 | 53.8-53.8 cM | View Comparative Map | ||||
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Species | Type | Name | Assoc. Type |
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Oryza sativa | QTL | AQA025 | qtl_marker |
Oryza sativa | QTL | AQA044 | qtl_marker |
Oryza sativa | QTL | AQEI043 | qtl_marker |
Oryza sativa | QTL | AQEY003 | qtl_marker |
Oryza sativa | QTL | AQFJ008 | qtl_marker |
Oryza sativa | QTL | AQG016 | qtl_marker |
Oryza sativa | QTL | AQGI037 | qtl_marker |
Oryza sativa | QTL | AQGI074 | qtl_marker |
Oryza sativa | QTL | AQGM012 | qtl_marker |
Oryza sativa | QTL | AQGP016 | qtl_marker |
Oryza sativa Indica Group | Primer | RM294_forward | primer_forward |
Oryza sativa Indica Group | Primer | RM294_reverse | primer_reverse |
Oryza sativa Indica Group | Genomic DNA | AF344120 | contained_in_sequence |
Oryza sativa Indica Group | Genomic DNA | AF344120 | source_sequence |