ID | 11068 |
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Name | RM495 |
Synonyms (0) | None. |
Type | SSR |
Species | Oryza sativa Japonica Group (Oryza sativa japonica) [ GR_tax:013684 ] |
Germplasm | |
Description | |
Tags () | None |
Marker Created: | |
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Marker Updated: | |
Internal Marker Accession: | RM495 |
Repeat Motif | (CTG)7 |
Anneal Temperature | 55 |
Expected PCR Product Size | 159 |
Sequence Source | AQ573939 |
Linkage Group | |
Remarks |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 1 | 215,956-216,133 bp | View Comparative Map | |||
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BNL6.32 | Chr. 1 | 215,973-216,131 bp | View Comparative Map | |||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Genetic | Cornell SSR 2001 | BNL6.32 | 1 | 2.8-2.8 cM | View Comparative Map | |||
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IRMI 2003 | BNL6.32 | 1 | 0.3-0.3 cM | View Comparative Map | ||||
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QTL | CNHAU Zhenshan 97/IRAT109 SSR QTL 2006 | BNL6.32 | 1 | 0-0 cM | View Comparative Map | |||
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Cornell IR64/Azu DH QTL 2001 | BNL6.32 | 1 | 2.8-2.8 cM | View Comparative Map | ||||
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NDSU EM93/SS18 BC QTL 2004 | BNL6.32 | 1 | 5.2-5.2 cM | View Comparative Map | ||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
QTL | USMSU O sativa CL16/O.nivara 80470 SSR QTL 2006 | BNL6.32 | 1 | 0.3-0.3 cM | View Comparative Map | |||
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Species | Type | Name | Assoc. Type |
---|---|---|---|
Oryza sativa | QTL | AQA021 | qtl_marker |
Oryza sativa Japonica Group | SSR | AUT10014 | equivalent_to |
Oryza sativa | QTL | EQC0001 | qtl_marker |
Oryza sativa | QTL | EQC0002 | qtl_marker |
Oryza sativa | QTL | EQC0003 | qtl_marker |
Oryza sativa Japonica Group | Primer | RM495_forward | primer_forward |
Oryza sativa Japonica Group | Primer | RM495_reverse | primer_reverse |
Oryza sativa Japonica Group | GSS | AQ573939 | contained_in_sequence |
Oryza sativa Japonica Group | GSS | AQ573939 | source_sequence |