ID | 11028 |
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Name | RM519 |
Synonyms (0) | None. |
Type | SSR |
Species | Oryza sativa Japonica Group (Oryza sativa japonica) [ GR_tax:013684 ] |
Germplasm | |
Description | |
Tags () | None |
Marker Created: | |
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Marker Updated: | |
Internal Marker Accession: | RM519 |
Repeat Motif | (AAG)8 |
Anneal Temperature | 55 |
Expected PCR Product Size | 122 |
Sequence Source | AQ690540 |
Linkage Group | |
Remarks |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 12 | 19,903,791-19,903,912 bp | View Comparative Map | |||
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BNL6.32 | Chr. 12 | 19,903,803-19,903,927 bp | View Comparative Map | |||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Genetic | CIAT SSR 2006 | BNL6.32 | 12 | 94.8-94.8 cM | View Comparative Map | |||
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Cornell SSR 2001 | BNL6.32 | 12 | 62.6-62.6 cM | View Comparative Map | ||||
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QTL | CNHAU Zhenshan 97/IRAT109 SSR QTL 2006 | BNL6.32 | 12 | 52.4-52.4 cM | View Comparative Map | |||
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Cornell IR64/Azu DH QTL 2001 | BNL6.32 | 12 | 62.6-62.6 cM | View Comparative Map | ||||
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NDSU EM93/SS18 BC QTL 2004 | BNL6.32 | 12 | 65.7-65.7 cM | View Comparative Map | ||||
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Species | Type | Name | Assoc. Type |
---|---|---|---|
Oryza sativa | QTL | AQFB013 | qtl_marker |
Oryza sativa | QTL | AQFB014 | qtl_marker |
Oryza sativa | QTL | AQFB015 | qtl_marker |
Oryza sativa Japonica Group | SSR | AUT28302 | equivalent_to |
Oryza sativa | QTL | CQAP3 | qtl_marker |
Oryza sativa Japonica Group | Primer | RM519_forward | primer_forward |
Oryza sativa Japonica Group | Primer | RM519_reverse | primer_reverse |
Oryza sativa Japonica Group | GSS | AQ690540 | contained_in_sequence |
Oryza sativa Japonica Group | GSS | AQ690540 | source_sequence |