ID | 10946 |
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Name | RM409 |
Synonyms (0) | None. |
Type | SSR |
Species | Oryza sativa Japonica Group (Oryza sativa japonica) [ GR_tax:013684 ] |
Germplasm | |
Description | |
Tags () | None |
Marker Created: | |
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Marker Updated: | |
Internal Marker Accession: | RM409 |
Repeat Motif | (AGC)8 |
Anneal Temperature | 55 |
Expected PCR Product Size | 96 |
Sequence Source | AQ156272 |
Linkage Group | |
Remarks |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 9 | 14,372,049-14,372,184 bp | View Comparative Map | |||
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BNL6.32 | Chr. 9 | 14,372,051-14,372,147 bp | View Comparative Map | |||||
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BNL6.32 | Chr. 9 | 14,372,062-14,372,156 bp | View Comparative Map | |||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Genetic | CIAT SSR 2006 | BNL6.32 | 9 | 63.6-63.6 cM | View Comparative Map | |||
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Cornell SSR 2001 | BNL6.32 | 9 | 45.6-45.6 cM | View Comparative Map | ||||
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QTL | Cornell IR64/Azu DH QTL 2001 | BNL6.32 | 9 | 45.6-45.6 cM | View Comparative Map | |||
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Species | Type | Name | Assoc. Type |
---|---|---|---|
Oryza sativa | QTL | AQA015 | qtl_marker |
Oryza sativa | QTL | AQA020 | qtl_marker |
Oryza sativa Japonica Group | SSR | AUT24268 | equivalent_to |
Oryza sativa Japonica Group | SSR | MRG5854.RGP5854 | equivalent_to |
Oryza sativa Japonica Group | Primer | RM409_forward | primer_forward |
Oryza sativa Japonica Group | Primer | RM409_reverse | primer_reverse |
Oryza sativa Japonica Group | GSS | AQ156272 | contained_in_sequence |
Oryza sativa Japonica Group | GSS | AQ156272 | source_sequence |