ID | 10917 |
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Name | RM331 |
Synonyms (1) | CTT13 |
Type | SSR |
Species | Oryza sativa Indica Group (Oryza sativa indica) [ GR_tax:013682 ] |
Germplasm | |
Description | |
Tags () | None |
Marker Created: | |
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Marker Updated: | |
Internal Marker Accession: | RM331 |
Repeat Motif | [(CTT)4GTT]2(CTT)11 |
Anneal Temperature | 55 |
Expected PCR Product Size | 176 |
Sequence Source | AF344155 |
Linkage Group | |
Remarks |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 8 | 12,294,124-12,294,755 bp | View Comparative Map | |||
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BNL6.32 | Chr. 8 | 12,294,291-12,294,446 bp | View Comparative Map | |||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | CIAT SSR 2006 | BNL6.32 | 8 | 60.5-60.5 cM | View Comparative Map | |||
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Cornell SSR 2001 | BNL6.32 | 8 | 60.9-69 cM | View Comparative Map | ||||
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IRMI 2003 | BNL6.32 | 8 | 54.3-54.3 cM | View Comparative Map | ||||
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QTL | CNHAU Zhenshan 97/IRAT109 SSR QTL 2006 | BNL6.32 | 8 | 46-46 cM | View Comparative Map | |||
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CNHZAU Zhe97/Wuy2 QTL 2004 | BNL6.32 | 8 | 69.2-69.2 cM | View Comparative Map | ||||
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CNYU Bal/Nan//Bal BC1 QTL 2001 | BNL6.32 | 8 | 0-0 cM | View Comparative Map | ||||
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Cornell IR64/Azu DH QTL 2001 | BNL6.32 | 8 | 60.9-60.9 cM | View Comparative Map | ||||
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Cornell IR64/IRG105 QTL 2003 | BNL6.32 | 2 | 102.8-102.8 cM | View Comparative Map | ||||
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Species | Type | Name | Assoc. Type |
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Oryza sativa | QTL | AQA009 | qtl_marker |
Oryza sativa | QTL | AQA014 | qtl_marker |
Oryza sativa | QTL | AQED028 | qtl_marker |
Oryza sativa | QTL | AQEI015 | qtl_marker |
Oryza sativa | QTL | AQEI030 | qtl_marker |
Oryza sativa | QTL | AQEI062 | qtl_marker |
Oryza sativa | QTL | AQFJ023 | qtl_marker |
Oryza sativa | QTL | AQFJ048 | qtl_marker |
Oryza sativa | QTL | AQFJ054 | qtl_marker |
Oryza sativa | QTL | AQG004 | qtl_marker |
Oryza sativa | QTL | AQGH004 | qtl_marker |
Oryza sativa | QTL | AQGH017 | qtl_marker |
Oryza sativa | QTL | AQGH021 | qtl_marker |
Oryza sativa | QTL | AQGH034 | qtl_marker |
Oryza sativa Japonica Group | SSR | AUT22835 | equivalent_to |
Oryza sativa | QTL | CQAP1 | qtl_marker |
Oryza sativa Indica Group | Primer | RM331_forward | primer_forward |
Oryza sativa Indica Group | Primer | RM331_reverse | primer_reverse |
Oryza sativa Indica Group | Genomic DNA | AF344155 | contained_in_sequence |
Oryza sativa Indica Group | Genomic DNA | AF344155 | source_sequence |
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