ID | 10893 |
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Name | RM531 |
Synonyms (0) | None. |
Type | SSR |
Species | Oryza sativa Japonica Group (Oryza sativa japonica) [ GR_tax:013684 ] |
Germplasm | |
Description | |
Tags () | None |
Marker Created: | |
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Marker Updated: | |
Internal Marker Accession: | RM531 |
Repeat Motif | (AT)15 |
Anneal Temperature | 55 |
Expected PCR Product Size | 128 |
Sequence Source | AQ843047 |
Linkage Group | |
Remarks |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 8 | 22,469,338-22,469,465 bp | View Comparative Map | |||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Genetic | CIAT SSR 2006 | BNL6.32 | 8 | 111-111 cM | View Comparative Map | |||
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Cornell SSR 2001 | BNL6.32 | 8 | 90.3-90.3 cM | View Comparative Map | ||||
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IRMI 2003 | BNL6.32 | 8 | 53.7-53.7 cM | View Comparative Map | ||||
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QTL | CNHAU Zhenshan 97/IRAT109 SSR QTL 2006 | BNL6.32 | 8 | 75.7-75.7 cM | View Comparative Map | |||
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Cornell IR64/Azu DH QTL 2001 | BNL6.32 | 8 | 90.3-90.3 cM | View Comparative Map | ||||
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NDSU EM93/SS18 BC QTL 2004 | BNL6.32 | 8 | 72.8-72.8 cM | View Comparative Map | ||||
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Species | Type | Name | Assoc. Type |
---|---|---|---|
Oryza sativa | QTL | AQFB011 | qtl_marker |
Oryza sativa | QTL | AQFB012 | qtl_marker |
Oryza sativa | QTL | AQGD010 | qtl_marker |
Oryza sativa | QTL | AQGD011 | qtl_marker |
Oryza sativa | QTL | AQGD012 | qtl_marker |
Oryza sativa | QTL | AQGD019 | qtl_marker |
Oryza sativa | QTL | AQGD022 | qtl_marker |
Oryza sativa | QTL | AQGF015 | qtl_marker |
Oryza sativa | QTL | AQGF017 | qtl_marker |
Oryza sativa | QTL | AQGP009 | qtl_marker |
Oryza sativa | QTL | AQGP040 | qtl_marker |
Oryza sativa | QTL | AQGP074 | qtl_marker |
Oryza sativa | QTL | CQAP1 | qtl_marker |
Oryza sativa Japonica Group | Primer | RM531_forward | primer_forward |
Oryza sativa Japonica Group | Primer | RM531_reverse | primer_reverse |
Oryza sativa Japonica Group | GSS | AQ843047 | contained_in_sequence |
Oryza sativa Japonica Group | GSS | AQ843047 | source_sequence |