ID | 10779 |
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Name | RM241 |
Synonyms (1) | CT404 |
Type | SSR |
Species | Oryza sativa Indica Group (Oryza sativa indica) [ GR_tax:013682 ] |
Germplasm | |
Description | |
Tags () | None |
Marker Created: | |
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Marker Updated: | |
Internal Marker Accession: | RM241 |
Repeat Motif | (CT)31 |
Anneal Temperature | 55 |
Expected PCR Product Size | 138 |
Sequence Source | AF344061 |
Linkage Group | |
Remarks |
Gramene Literature | Chen-X, Temnykh-S, Xu-Y, Cho-Y-G, McCouch-S-R, "Development of a microsatellite framework map providing genome-wide coverage in rice (Oryza sativa L.)", Theoretical and applied genetics, 1997, vol. 95, pp. 553-567 |
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Gramene Diversity Rice Marker | 174 |
Gramene Diversity Rice Marker | 1247 |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 4 | 26,857,374-26,857,637 bp | View Comparative Map | |||
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BNL6.32 | Chr. 4 | 26,857,392-26,857,523 bp | View Comparative Map | |||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | CIAT SSR 2006 | BNL6.32 | 4 | 131.8-131.8 cM | View Comparative Map | |||
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Cornell SSR 2001 | BNL6.32 | 4 | 106.2-106.2 cM | View Comparative Map | ||||
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IGCN 1998 | BNL6.32 | 4 | 72.3-72.3 cM | View Comparative Map | ||||
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IRMI 2003 | BNL6.32 | 4 | 83-83 cM | View Comparative Map | ||||
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KRGRP 1998 | BNL6.32 | 4 | 84.7-84.7 cM | View Comparative Map | ||||
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QTL | CNHAU Zhen97/ H94 QTL 2005 | BNL6.32 | 4 | 102.3-102.3 cM | View Comparative Map | |||
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CNHAU Zhenshan 97/IRAT109 SSR QTL 2006 | BNL6.32 | 4 | 73.6-73.6 cM | View Comparative Map | ||||
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CNHZAU Zh97/Ming63 RI QTL 2002 | BNL6.32 | 4 | 88.4-88.4 cM | View Comparative Map | ||||
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CNHZAU Zhe97/Wuy2 QTL 2004 | BNL6.32 | 4 | 82.1-82.1 cM | View Comparative Map | ||||
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CNRRI Zh97B/Mil46 RI QTL 2002 | BNL6.32 | 4b | 17.4-17.4 cM | View Comparative Map | ||||
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CNZU IR1552/Azu RI QTL 2003 | BNL6.32 | 4b | 34.9-34.9 cM | View Comparative Map | ||||
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CNZU IR1552/Azu RI QTL 2004 | BNL6.32 | 4b | 34.9-34.9 cM | View Comparative Map | ||||
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Cornell IR64/Azu DH QTL 2001 | BNL6.32 | 4 | 106.2-106.2 cM | View Comparative Map | ||||
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Cornell IR64/IRG105 QTL 2003 | BNL6.32 | 4 | 139.1-139.1 cM | View Comparative Map | ||||
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Cornell Jef/Oruf BC QTL 2003 | BNL6.32 | 4 | 41.4-41.4 cM | View Comparative Map | ||||
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Cornell V20A/Oruf QTL 1998 | BNL6.32 | 4 | 46.9-50 cM | View Comparative Map | ||||
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IGCN ZYQ18/JX17 DH QTL 1998 | BNL6.32 | 4 | 72.3-72.3 cM | View Comparative Map | ||||
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JHPRC Rei/Yamd QTL 2002 | BNL6.32 | 4 | 197.2-197.2 cM | View Comparative Map | ||||
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JUT Akihi/IRAT109 QTL 2004 | BNL6.32 | 4 | 95.95-95.95 cM | View Comparative Map | ||||
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KRGRP Mil23/Gih QTL 1998 | BNL6.32 | 4 | 84.7-84.7 cM | View Comparative Map | ||||
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LSU Caiapo/IRGC103544 QTL 2004 | BNL6.32 | 4 | 3.2-3.2 cM | View Comparative Map | ||||
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M202/IR50 UCD QTL 2003 | BNL6.32 | 4 | 67.4-67.4 cM | View Comparative Map | ||||
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NDSU EM93/SS18 BC QTL 2004 | BNL6.32 | 4 | 95.3-95.3 cM | View Comparative Map | ||||
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TKU Integrated QTL 2002 | BNL6.32 | 4 | 69.1-69.1 cM | View Comparative Map | ||||
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