ID | 10775 |
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Name | RM559 |
Synonyms (0) | None. |
Type | SSR |
Species | Oryza sativa Japonica Group (Oryza sativa japonica) [ GR_tax:013684 ] |
Germplasm | |
Description | |
Tags () | None |
Marker Created: | |
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Marker Updated: | |
Internal Marker Accession: | RM559 |
Repeat Motif | (AACA)6 |
Anneal Temperature | 55 |
Expected PCR Product Size | 160 |
Sequence Source | AQ912800 |
Linkage Group | |
Remarks |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 4 | 35,151,595-35,151,763 bp | View Comparative Map | |||
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BNL6.32 | Chr. 4 | 35,151,601-35,151,760 bp | View Comparative Map | |||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Genetic | CIAT SSR 2006 | BNL6.32 | 4 | 173.3-173.3 cM | View Comparative Map | |||
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Cornell SSR 2001 | BNL6.32 | 4 | 155.8-155.8 cM | View Comparative Map | ||||
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IRMI 2003 | BNL6.32 | 4 | 129.6-129.6 cM | View Comparative Map | ||||
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QTL | CNHAU Zhenshan 97/IRAT109 SSR QTL 2006 | BNL6.32 | 4 | 111.2-111.2 cM | View Comparative Map | |||
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Cornell IR64/Azu DH QTL 2001 | BNL6.32 | 4 | 155.8-155.8 cM | View Comparative Map | ||||
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NDSU EM93/SS18 BC QTL 2004 | BNL6.32 | 4 | 160.7-160.7 cM | View Comparative Map | ||||
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Species | Type | Name | Assoc. Type |
---|---|---|---|
Oryza sativa | QTL | AQFB001 | qtl_marker |
Oryza sativa | QTL | AQFB002 | qtl_marker |
Oryza sativa | QTL | AQFB003 | qtl_marker |
Oryza sativa | QTL | AQGD023 | qtl_marker |
Oryza sativa | QTL | AQGD025 | qtl_marker |
Oryza sativa | QTL | AQGD027 | qtl_marker |
Oryza sativa Japonica Group | SSR | AUT17692 | equivalent_to |
Oryza sativa Japonica Group | Primer | RM559_forward | primer_forward |
Oryza sativa Japonica Group | Primer | RM559_reverse | primer_reverse |
Oryza sativa Japonica Group | GSS | AQ912800 | contained_in_sequence |
Oryza sativa Japonica Group | GSS | AQ912800 | source_sequence |