ID | 10739 |
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Name | RM422 |
Synonyms (0) | None. |
Type | SSR |
Species | Oryza sativa Japonica Group (Oryza sativa japonica) [ GR_tax:013684 ] |
Germplasm | |
Description | |
Tags () | None |
Marker Created: | |
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Marker Updated: | |
Internal Marker Accession: | RM422 |
Repeat Motif | (AG)30 |
Anneal Temperature | 55 |
Expected PCR Product Size | 385 |
Sequence Source | AQ256760 |
Linkage Group | |
Remarks |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 3 | 33,709,088-33,709,480 bp | View Comparative Map | |||
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BNL6.32 | Chr. 3 | 33,709,142-33,709,541 bp | View Comparative Map | |||||
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BNL6.32 | Chr. 3 | 33,709,244-33,709,390 bp | View Comparative Map | |||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Genetic | CIAT SSR 2006 | BNL6.32 | 3 | 166.6-166.6 cM | View Comparative Map | |||
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Cornell SSR 2001 | BNL6.32 | 3 | 205.4-205.4 cM | View Comparative Map | ||||
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QTL | CNHAU Zhenshan 97/IRAT109 SSR QTL 2006 | BNL6.32 | 3 | 150.5-150.5 cM | View Comparative Map | |||
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Cornell IR64/Azu DH QTL 2001 | BNL6.32 | 3 | 205.4-205.4 cM | View Comparative Map | ||||
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Cornell IR64/IRG105 QTL 2003 | BNL6.32 | 3 | 183-183 cM | View Comparative Map | ||||
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JUT Akihi/IRAT109 QTL 2004 | BNL6.32 | 3 | 165.96-165.96 cM | View Comparative Map | ||||
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Species | Type | Name | Assoc. Type |
---|---|---|---|
Oryza sativa | QTL | AQED045 | qtl_marker |
Oryza sativa | QTL | AQHF020 | qtl_marker |
Oryza sativa | QTL | AQHF024 | qtl_marker |
Oryza sativa | QTL | AQHF028 | qtl_marker |
Oryza sativa | QTL | AQHF041 | qtl_marker |
Oryza sativa | QTL | AQHF047 | qtl_marker |
Oryza sativa | QTL | AQJ003 | qtl_marker |
Oryza sativa Japonica Group | SSR | AUT16092 | equivalent_to |
Oryza sativa | QTL | CQAE21 | qtl_marker |
Oryza sativa Japonica Group | SSR | MRG0373.RGP0373 | equivalent_to |
Oryza sativa Japonica Group | Primer | RM422_forward | primer_forward |
Oryza sativa Japonica Group | Primer | RM422_reverse | primer_reverse |
Oryza sativa Japonica Group | GSS | AQ256760 | contained_in_sequence |
Oryza sativa Japonica Group | GSS | AQ256760 | source_sequence |