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Zea mays mRNA "AY111142"
| ID | 1071292 |
|---|---|
| Name |
AY111142 (GenBank Accession  ) |
| Synonyms (0) | None. |
| GenBank GI | 21215732 |
| GenBank Version | AY111142.1 |
| MaizeGDB cDNA - EST | CL9565_1 |
| MaizeGDB INDEL | AY111142_IDP |
| MAIZEGDB EST | CL9565_1 |
| Type | mRNA |
| Species | Zea mays (Maize) [ GR_tax:014450 ] |
| Germplasm | |
| Description | Zea mays CL9565_1 mRNA sequence. |
| Tags () | None |
Source/Library
Details
| Marker Created: | |
|---|---|
| Marker Updated: | |
| Internal Marker Accession: | AY111142 |
| Date Created | |
| Date Updated | |
| Ec Number | |
| Allele | |
| Bound Moiety | |
| Cell Line | |
| Cell Type | |
| Chromosome | |
| Citation | |
| Clone | |
| Clone Lib | Maize Mapping Project/DuPont Cornsensus Library |
| Codon Start | |
| Comment |
If you are interested in getting corresponding physical clones, these are publicly available from ZmDB and may be found by BLAST searching at MSL, maizemap.org; ZmDB, www.zmdb.iastate.edu; TIGR, www.tigr.org; or NCBI, www.ncbi.nlm.nih.gov. When the source of the maize cDNA sequences is either Virginia Walbot, Stanford or Pat Schnable, Iowa State, then clones may be requested from ZmDB: www.zmdb.iastate.edu. |
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| Cons Splice | |
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| Function | |
| Gene | |
| Germline | |
| Haplotype | |
| Insertion Seq | |
| Isolate | |
| Isolation Source | |
| Keyword | HTC |
| Lab Host | |
| Label | |
| Locus Tag | |
| Macronuclear | |
| Map | |
| Mod Base | |
| Mol Type | mRNA |
| Note |
this sequence is part of a project of EST assemblies resulting from the application of public contigs to seed DuPont contigs; this resource was assembled by DuPont as part of a collaboration for the overgo addressing of BACs in conjunction with the Maize Mapping Project |
| Number | |
| Origin | |
| Phenotype | |
| Plasmid | |
| Pop Variant | |
| Product | |
| Protein Id | |
| Pseudo | |
| Rearranged | |
| Ref Authors | Coe,E.H. |
| Ref Location |
Submitted (25-APR-2002) Maize Mapping Project, University of Missouri, Columbia, MO 65211, USA |
| Ref Pubmed | |
| Ref Title | Direct Submission |
| Ref Year | 2004 |
| Rpt Family | |
| Rpt Type | |
| Rpt Unit | |
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| Specimen Voucher | |
| Standard Name | |
| Sub Clone | |
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| Sub Strain | |
| Tissue Lib | |
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| Transl Except | |
| Transl Table | |
| Translation | |
| Transposon | |
| Variety |
Database Cross-References (1)
| PubMed | 15020742 |
|---|
Sequences (2)
mRNA Sequence (1)
Related Sequence (1)
Align All Sequences
Map Positions (3)
| Map Type | Map Set | Name | Map | Position | Ext. Links | |||
|---|---|---|---|---|---|---|---|---|
| Physical | FPC Chr maize May 2006 | BNL6.32 | 5 | 29,943,901-29,943,901 bp | ||||
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| FPC maize May 2006 | BNL6.32 | ctg215 | 26-26 bands | View Comparative Map | ||||
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| Map Type | Map Set | Name | Map | Position | Ext. Links | |||
|---|---|---|---|---|---|---|---|---|
| Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 10 | 17,657,078-17,657,357 bp | View Comparative Map | |||
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Associations (17)
| Species | Type | Name | Assoc. Type |
|---|---|---|---|
| Zea mays | Genomic DNA | AC155596 | hybridisation |
| Zea mays subsp. mays | OVERGO | CL9565_1_ov | contained_in_sequence |
| Zea mays subsp. mays | Maize Bin | Bin 5.03 | bin_marker |
| Zea mays | Clone | ZMMBBb0101D03 | hybridisation |
| Zea mays | Clone | ZMMBBb0123C09 | hybridisation |
| Zea mays | Clone | ZMMBBb0124C20 | hybridisation |
| Zea mays | Clone | ZMMBBb0142K22 | hybridisation |
| Zea mays | Clone | ZMMBBb0161C19 | hybridisation |
| Zea mays | Clone | ZMMBBb0165B16 | hybridisation |
| Zea mays | Clone | ZMMBBb0169L06 | hybridisation |
| Zea mays | Clone | ZMMBBb0174K01 | hybridisation |
| Zea mays | Clone | ZMMBBb0211J08 | hybridisation |
| Zea mays | Clone | ZMMBBc0014N02 | hybridisation |
| Zea mays | Clone | ZMMBBc0056K08 | hybridisation |
| Zea mays | Clone | ZMMBBc0066G04 | hybridisation |
| Zea mays | Clone | ZMMBBc0070I08 | hybridisation |
| Zea mays | Clone | ZMMBBc0112L12 | hybridisation |
Associated Ontologies (0)
Images (0)
