ID | 10710 |
---|---|
Name | RM550 |
Synonyms (0) | None. |
Type | SSR |
Species | Oryza sativa Japonica Group (Oryza sativa japonica) [ GR_tax:013684 ] |
Germplasm | |
Description | |
Tags () | None |
Marker Created: | |
---|---|
Marker Updated: | |
Internal Marker Accession: | RM550 |
Repeat Motif | (CCT)8 |
Anneal Temperature | 55 |
Expected PCR Product Size | 231 |
Sequence Source | AQ868907 |
Linkage Group | |
Remarks |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 2 | 12,464,295-12,464,525 bp | View Comparative Map | |||
|
||||||||
BNL6.32 | Chr. 2 | 12,464,299-12,464,559 bp | View Comparative Map | |||||
|
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Genetic | CIAT SSR 2006 | BNL6.32 | 2 | 60.5-60.5 cM | View Comparative Map | |||
|
||||||||
Cornell SSR 2001 | BNL6.32 | 2 | 58.4-66 cM | View Comparative Map | ||||
|
||||||||
QTL | CNHAU Zhenshan 97/IRAT109 SSR QTL 2006 | BNL6.32 | 2 | 62.4-62.4 cM | View Comparative Map | |||
|
||||||||
Cornell IR64/Azu DH QTL 2001 | BNL6.32 | 2 | 62.2-62.2 cM | View Comparative Map | ||||
|
||||||||
Cornell IR64/IRG105 QTL 2003 | BNL6.32 | 2 | 95-95 cM | View Comparative Map | ||||
|
Species | Type | Name | Assoc. Type |
---|---|---|---|
Oryza sativa | QTL | AQED028 | qtl_marker |
Oryza sativa | QTL | AQHF015 | qtl_marker |
Oryza sativa | QTL | AQHF037 | qtl_marker |
Oryza sativa | QTL | AQHF040 | qtl_marker |
Oryza sativa Japonica Group | SSR | AUT13066 | equivalent_to |
Oryza sativa Japonica Group | Primer | RM550_forward | primer_forward |
Oryza sativa Japonica Group | Primer | RM550_reverse | primer_reverse |
Oryza sativa Japonica Group | GSS | AQ868907 | contained_in_sequence |
Oryza sativa Japonica Group | GSS | AQ868907 | source_sequence |