Species | Oryza sativa (Rice) [ GR_tax:013681 ] | ||
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Accession | GR:0101265 | ||
Gene Symbol | GF14f | ||
Gene Name | G-box factor 14-3-3 f | ||
Synonyms (2) |
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E.C. Numbers (0) | |||
Pathway Reactions (2) |
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Chromosome No. | 3 | ||
Gene Type | CDS (Protein coding) | ||
Has Phenotype | no | ||
Description | It belongs to a 14-3-3 protein family. These proteins are known to function as regulators in a variety of biological processes. The transcripts were abundant and constitutively expressed in developing seeds and glumes, 10 days old seedling shoot and roots, adult plant roots, stem and leaves. Relatively lower expression was observed in developing seed. |
Protein |
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Nucleotide (DNA) |
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 3 | 28,656,820-28,661,023bp | View Comparative Map | |||
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Map Position [ View in Marker DB ] | |||||
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# | Map Set Name | Linkage Group | Start Position | Stop Position | CMap Feature Acc |
1 | Rice japonica MSU6 | Chr. 3 | 28656820 bp | 28661023 bp | grjp2009a-3-GR:0101265 |
Plant Structure | root (PO:0009005), seed (PO:0009010), vascular leaf (PO:0009025), glume (PO:0009039), stem (PO:0009047) |
Cereal Plant Growth Stage | 1-4 leaf stage (GRO:0007142), vegetative lag phase (GRO:0007146) |
Cellular Component | nucleus (GO:0005634), cytoplasm (GO:0005737) |
Molecular Function | phospholipase A2 activity (GO:0004623), protein kinase C inhibitor activity (GO:0008426) |
Biological Process | DNA damage checkpoint (GO:0000077), activation of tryptophan 5-monooxygenase activity (GO:0006588) |
Environment | sodium chloride regimen (EO:0007048), abscisic acid regimen (EO:0007105), cold temperature regimen (EO:0007174), long day length regimen (EO:0007199), short day length regimen (EO:0007200), Magnaporthe grisea (EO:0007226), tissue culture growth media (EO:0007266), continuous dark (no light) regimen (EO:0007270), rice yellow mottle virus (EO:0007318), unknown environment (EO:0007403), drought environment (EO:0007404) |
Chr | Start | Stop | Exp | Num. SNP Positions | |
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chr3 | 28,656,820 | 28,661,023 | ~160K SNPs x 20 accessions (McNally 2... | 0 | |
chr3 | 28,656,820 | 28,661,023 | '1536 chip' - 1311 SNPs x 395 rice ac... | 0 | |
chr3 | 28,656,820 | 28,661,023 | Huang X, et al, Nat Genetics 2010 Nov... | 3 | Search for SNPs |
chr3 | 28,656,820 | 28,661,023 | RiceDiversity 44K SNP assay, 34 trait... | 3 | Search for SNPs |
chr3 | 28,656,820 | 28,661,023 | RiceDiversity 44K SNP assay, 34 trait... | 0 |