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Release Notes
Browse Ontology Database by:
Trait
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Plant Structure
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Growth Stage
Find:
In:
Gene Symbol & Name
Gene Accession
Chromosome No.
TO:Trait
PO:Plant Structure
PO:Plant Growth and Development Stage
GRO:Cereal Plant Growth Stage
GO:Cellular Component
GO:Molecular Function
GO:Biological Process
EO:Environment
GenBank Accession
Gramene Protein Accession
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Type:
Not sequenced
CDS (Protein coding)
rRNA (Ribosomal RNA)
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Species:
Aegilops
Aegilops x Triticum
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All Species
With Phenotype
E.g.,
d1
,
dwarf-1
,
GR:0060184
,
flower*
,
*tillering stage*
Or
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Oryza sativa gene "WH" (GR:0061001)
Species
Oryza sativa (Rice)
[
GR_tax:013681
]
Accession
GR:0061001
Gene Symbol
WH
Gene Name
WHITE HULL
Synonyms (5)
Hw
Wh
White hull
Wh
White hull
E.C. Numbers (0)
Pathway Reactions (0)
Chromosome No.
4
Gene Type
Not sequenced
Has Phenotype
yes
Description
The mutant hull appears dull chalky white in contrast to normal straw color.
Alleles (1)
Wh.1 (Hw.1)
Germplasm (7)
L123
L11
L99
H331
H332
H334
H336
Sequences (0)
Gene-To-Gene Interactions (0)
Gene Interactions (0)
Map Positions (1)
Oryza sativa (1)
Map Type
Map Set
Name
Map
Position
Ext. Links
Genetic
Hokkaido Morphological 2000
BNL6.32
4
87-103cM
View Comparative Map
Details
Date Created
Mapping Method:
Comments
CMap Preview
Gene Map Positions (1)
Map Position
[ View in Marker DB ]
#
Map Set Name
Linkage Group
Start Position
Stop Position
CMap Feature Acc
1
Hokkaido Morphological 2000
4
87 cM
103 cM
morph-2000-4-ip13
Associated Ontologies (14)
Trait
seed coat color
(TO:0000190)
, lemma and palea color
(TO:0000264)
Plant Structure
lemma
(PO:0009037)
, palea
(PO:0009038)
, seed coat
(PO:0009088)
Plant Growth and Development Stage
whole plant fruit ripening stage
(PO:0007010)
, whole plant fruit ripening complete stage
(PO:0007038)
, inflorescence emergence stage
(PO:0007041)
, whole plant fruit formation stage
(PO:0007042)
Cereal Plant Growth Stage
08-dough stage
(GRO:0007042)
, 06-heading stage
(GRO:0007044)
, 09-mature grain stage
(GRO:0007045)
, 07-milk stage
(GRO:0007046)
Biological Process
biological_process
(GO:0008150)
Associated QTL (0)
Database Cross-References (1)
Oryzabase:
603
Literature (6)
Jodon-N-E., "Present status of rice genetics",
J Agr Assoc China
, 1955, vol. 10(NS), pp. 21-21
Jodon-N-E., "Inheritance of some of the more striking character in rice",
Journal of heredity
, 1957, vol. 48(4), pp. 181-192
Nagao-S, Takahashi-M., "Trial construction of twelve linkage groups in Japanese rice (Genetical studies on rice plant, XXVII)",
J Fac Agr Hokkaido Univ
, 1963, vol. 53(1), pp. 72-130
Takahashi-M., "Linkage groups and gene schemes of some striking morphological characters in Japanese rice",
Symp Rice Genet Cytogenet, Internatl Rice Res Inst (1963) Elsevier, Amsterdam
, 1964, pp. 215-236
Jodon-N-E., "Gentetic segregation and linkage, important phases of rice research",
Symp Rice Genet Cytogenet, Internatl Rice Res Inst (1963) Elsevier, Amsterdam
, 1964, pp. 193-204
Kinoshita-T., "Gene analysis and linkage map",
Biology of Rice. Tsunoda-S, Takahashi-N (eds.), JSSP/Elsevier, Tokyo.
, 1984, pp. 187-274
Images (2)
1.
1. White hull color in comparison with straw color.
2.
2. Whitish-yellow colored hull (on bottom).
SNPs (0)