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Release Notes
Browse Ontology Database by:
Trait
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Plant Structure
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Growth Stage
Find:
In:
Gene Symbol & Name
Gene Accession
Chromosome No.
TO:Trait
PO:Plant Structure
PO:Plant Growth and Development Stage
GRO:Cereal Plant Growth Stage
GO:Cellular Component
GO:Molecular Function
GO:Biological Process
EO:Environment
GenBank Accession
Gramene Protein Accession
All Fields
Type:
Not sequenced
CDS (Protein coding)
rRNA (Ribosomal RNA)
tRNA (Transfer RNA)
Pseudogene (non-functional)
Not classified
miRNA (MicroRNA)
siRNA (Small interfering RNA)
Sequenced Gene Loci
All Gene Types
Species:
Aegilops
Aegilops x Triticum
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Elymus (Wild rye)
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Oryza sativa (Rice)
Phalaris
Secale
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Zea mays subsp. mays (Maize)
All Species
With Phenotype
E.g.,
d1
,
dwarf-1
,
GR:0060184
,
flower*
,
*tillering stage*
Or
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Oryza sativa gene "Pho" (GR:0060610)
Species
Oryza sativa (Rice)
[
GR_tax:013681
]
Accession
GR:0060610
Gene Symbol
Pho
Gene Name
Phosphorus deficiency tolerance
Synonyms (1)
PHO
E.C. Numbers (0)
Pathway Reactions (0)
Chromosome No.
12
Gene Type
Not sequenced
Has Phenotype
yes
Description
Show high tolerance to phosphorus deficiency condition at seedling and tillering stages.
Alleles (0)
Germplasm (0)
Sequences (0)
Gene-To-Gene Interactions (0)
Gene Interactions (0)
Map Positions (2)
Oryza sativa (1)
Map Type
Map Set
Name
Map
Position
Ext. Links
QTL
CNZU IR20/IR55178 RI QTL 1998
BNL6.32
12
27.8-27.8cM
View Comparative Map
Details
Date Created
Mapping Method:
Comments
CMap Preview
Oryza sativa x Oryza longistaminata (1)
Map Type
Map Set
Name
Map
Position
Ext. Links
Genetic
Cornell RFLP 2001
BNL6.32
12
66.35-77.35cM
View Comparative Map
Details
Date Created
Mapping Method:
Comments
CMap Preview
Gene Map Positions (2)
Map Position
[ View in Marker DB ]
#
Map Set Name
Linkage Group
Start Position
Stop Position
CMap Feature Acc
1
Cornell RFLP 2001
12
66.35 cM
77.35 cM
cu-sl-2001-12-ip3
2
CNZU IR20/IR55178 RI QTL 1998
12
27.8 cM
27.8 cM
nij1998a-129
Associated Ontologies (6)
Trait
phosphorus sensitivity
(TO:0000102)
Plant Structure
whole plant
(PO:0000003)
, plant structure
(PO:0009011)
Plant Growth and Development Stage
whole plant development stage
(PO:0007033)
, plant structure development stage
(PO:0009012)
Biological Process
response to abiotic stimulus
(GO:0009628)
Associated QTL (0)
Database Cross-References (0)
Literature (5)
Ni-J-J, Wu-P, Senadhira-D, Huang-N., "Mapping QTLs for phosphorus deficiency tolerance in rice (Oryza sativa L.)",
Theoretical and applied genetics
, 1998, vol. 97, pp. 1361-1369
Wissuwa-M, Yano-M, Ae-N., "Mapping of QTLs for phosphorus-deficiency tolerance in rice (Oryza sativa L.)",
Theoretical and applied genetics
, 1998, vol. 97, pp. 777-783
Wissuwa-M, Ae-N., "Further characterization of two QTLs that increase phosphorus uptake of rice (Oryza sativa L.) under phosphorus deficiency",
Plant and Soil
, 2001, vol. 237(2), pp. 275-286
Wissuwa-M, Ae-N., "Genotypic variation for tolerance to phosphorus deficiency in rice and the potential for its exploitation in rice improvement",
Plant Breeding
, 2001, vol. 120, pp. 43-48
Wissuwa-M, Wegner-J, Ae-N, Yano-M., "Substitution mapping of Pup1: a major QTL increasing phosphorus uptake of rice from a phosphorus-deficient soil",
Theoretical and applied genetics
, 2002, vol. 105, pp. 890-897
Images (0)
SNPs (0)