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Oryza sativa gene "FC1" (GR:0060322) | Species | Oryza sativa (Rice) [ GR_tax:013681 ] | ||||||
|---|---|---|---|---|---|---|---|
| Accession | GR:0060322 | ||||||
| Gene Symbol | FC1 | ||||||
| Gene Name | FINE CULM 1 | ||||||
| Synonyms (5) |
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| E.C. Numbers (0) | |||||||
| Pathway Reactions (0) | |||||||
| Chromosome No. | 3 | ||||||
| Gene Type | CDS (Protein coding) | ||||||
| Has Phenotype | yes | ||||||
| Description | Many tillers with fine culms, normal height. | ||||||
| Curator Comment | The fine culm-1 (fc1, GR:0060322) of mutant M56 is allelic to OsTB1 (GR:0080012) from Nipponbare. fc1 is the loss-of-function mutation of OsTB1. |
Alleles (1) Germplasm (1) 
Sequences (0)
Gene-To-Gene Interactions (0)
Gene Interactions (0)
Map Positions (3) | Map Type | Map Set | Name | Map | Position | Ext. Links | |||
|---|---|---|---|---|---|---|---|---|
| Genetic | Hokkaido Morphological 2000 | BNL6.32 | 3 | 146-146cM | View Comparative Map | |||
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| JRGP RFLP 2000 | BNL6.32 | 3 | 125.5-147.5cM | View Comparative Map | ||||
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| Map Type | Map Set | Name | Map | Position | Ext. Links | |||
|---|---|---|---|---|---|---|---|---|
| Genetic | Cornell RFLP 2001 | BNL6.32 | 3 | 96.5-118.5cM | View Comparative Map | |||
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Gene Map Positions (3) | Map Position [ View in Marker DB ] | |||||
|---|---|---|---|---|---|
| # | Map Set Name | Linkage Group | Start Position | Stop Position | CMap Feature Acc |
| 1 | Cornell RFLP 2001 | 3 | 96.5 cM | 118.5 cM | cu-sl-2001-3-ip3 |
| 2 | JRGP RFLP 2000 | 3 | 125.5 cM | 147.5 cM | jrgp-2000-3-ip6 |
| 3 | Hokkaido Morphological 2000 | 3 | 146 cM | 146 cM | morph-2000-3-21 |
Associated Ontologies (13) | Trait | stem thickness (TO:0000339), tiller number (TO:0000346) |
| Plant Structure | axillary shoot system (PO:0006343), stem (PO:0009047) |
| Plant Growth and Development Stage | booting stage (PO:0007014), LP.05 five leaves visible stage (PO:0007065), 2 formation of axillary shoot stage (PO:0007073), stem elongation stage (PO:0007089), LP.06 six leaves visible stage (PO:0007123) |
| Cereal Plant Growth Stage | 04-stem elongation stage (GRO:0007048), 03-tillering stage (GRO:0007049), 05-booting stage (GRO:0007148) |
| Biological Process | multicellular organismal development (GO:0007275) |
Associated QTL (0)
Database Cross-References (1) Literature (11) Images (1) 1.
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1. Slender and fine culms with leaf-traces on panicle neck (on right). |
SNPs (0)
