Species | Oryza sativa (Rice) [ GR_tax:013681 ] | ||||
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Accession | GR:0020082 | ||||
Gene Symbol | ga20ox4 | ||||
Gene Name | gibberellin C-20 oxidase 4 | ||||
Synonyms (4) |
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E.C. Numbers (1) | 1.14.11.15 | ||||
Pathway Reactions (3) |
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Chromosome No. | 5 | ||||
Gene Type | CDS (Protein coding) | ||||
Has Phenotype | |||||
Description | The deduced protein sequence suggests that the enzyme family GA20ox catalyzes the conversion of GA53 to GA20, thus taking part in the Gibberellic acid biosynthesis pathway. |
Protein |
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Nucleotide (DNA) |
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 5 | 20,622,787-20,629,715bp | View Comparative Map | |||
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Map Position [ View in Marker DB ] | |||||
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# | Map Set Name | Linkage Group | Start Position | Stop Position | CMap Feature Acc |
1 | Rice japonica MSU6 | Chr. 5 | 20622787 bp | 20629715 bp | grjp2009a-5-GR:0020082 |
Trait | growth and development trait (TO:0000357), enzyme activity trait (TO:0000599) |
Plant Growth and Development Stage | whole plant development stage (PO:0007033), leaf production stage (PO:0007133), sporophyte vegetative stage (PO:0007134) |
Cereal Plant Growth Stage | rice growth stage (GRO:0007040), 02-seedling (GRO:0007047), A-vegetative stage (GRO:0007139) |
Molecular Function | metallocarboxypeptidase activity (GO:0004181), iron ion binding (GO:0005506), isopenicillin-N synthase activity (GO:0016216), oxidoreductase activity (GO:0016491) |
Biological Process | proteolysis (GO:0006508), gibberellin metabolic process (GO:0009685), antibiotic biosynthetic process (GO:0017000) |
Environment | Magnaporthe grisea (EO:0007226), laboratory study (EO:0007255), unknown environment (EO:0007403) |
Chr | Start | Stop | Exp | Num. SNP Positions | |
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chr5 | 20,622,787 | 20,629,715 | ~160K SNPs x 20 accessions (McNally 2... | 14 | Search for SNPs |
chr5 | 20,622,787 | 20,629,715 | '1536 chip' - 1311 SNPs x 395 rice ac... | 0 | |
chr5 | 20,622,787 | 20,629,715 | Huang X, et al, Nat Genetics 2010 Nov... | 8 | Search for SNPs |
chr5 | 20,622,787 | 20,629,715 | RiceDiversity 44K SNP assay, 34 trait... | 8 | Search for SNPs |
chr5 | 20,622,787 | 20,629,715 | RiceDiversity 44K SNP assay, 34 trait... | 3 | Search for SNPs |