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Oryza sativa gene "KS3" (GR:0020069) | Species | Oryza sativa (Rice) [ GR_tax:013681 ] | ||||||||
|---|---|---|---|---|---|---|---|---|---|
| Accession | GR:0020069 | ||||||||
| Gene Symbol | KS3 | ||||||||
| Gene Name | Ent-kaurene synthase 3 | ||||||||
| Synonyms (8) |
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| E.C. Numbers (0) | |||||||||
| Pathway Reactions (1) | Ent-kaurene synthase | ||||||||
| Chromosome No. | 4 | ||||||||
| Gene Type | Pseudogene (non-functional) | ||||||||
| Has Phenotype | |||||||||
| Description | It is a pseudogene |
Alleles (1) Germplasm (1) Sequences (5) | Nucleotide (DNA) |
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Gene-To-Gene Interactions (0)
Gene Interactions (0)
Map Positions (1) | Map Type | Map Set | Name | Map | Position | Ext. Links | |||
|---|---|---|---|---|---|---|---|---|
| Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 4 | 30,834,247-30,839,140bp | View Comparative Map | |||
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Gene Map Positions (1) | Map Position [ View in Marker DB ] | |||||
|---|---|---|---|---|---|
| # | Map Set Name | Linkage Group | Start Position | Stop Position | CMap Feature Acc |
| 1 | Rice japonica MSU6 | Chr. 4 | 30834247 bp | 30839140 bp | grjp2009a-4-GR:0020069 |
Associated Ontologies (7) | Plant Growth and Development Stage | whole plant development stage (PO:0007033), leaf production stage (PO:0007133), sporophyte vegetative stage (PO:0007134) |
| Cereal Plant Growth Stage | rice growth stage (GRO:0007040), 02-seedling (GRO:0007047), A-vegetative stage (GRO:0007139) |
| Environment | unknown environment (EO:0007403) |
Associated QTL (0)
Database Cross-References (0)
Literature (2) Images (0)
SNPs (32) | Chr | Start | Stop | Exp | Num. SNP Positions | |
|---|---|---|---|---|---|
| chr4 | 30,834,247 | 30,839,140 | ~160K SNPs x 20 accessions (McNally 2... | 0 | |
| chr4 | 30,834,247 | 30,839,140 | '1536 chip' - 1311 SNPs x 395 rice ac... | 0 | |
| chr4 | 30,834,247 | 30,839,140 | Huang X, et al, Nat Genetics 2010 Nov... | 16 | Search for SNPs |
| chr4 | 30,834,247 | 30,839,140 | RiceDiversity 44K SNP assay, 34 trait... | 16 | Search for SNPs |
| chr4 | 30,834,247 | 30,839,140 | RiceDiversity 44K SNP assay, 34 trait... | 0 |
