Species | Oryza sativa (Rice) [ GR_tax:013681 ] | ||
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Accession | GR:0020055 | ||
Gene Symbol | rr1 | ||
Gene Name | Type A response regulator 1 | ||
Synonyms (2) |
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E.C. Numbers (0) | |||
Pathway Reactions (0) | |||
Chromosome No. | 1 | ||
Gene Type | CDS (Protein coding) | ||
Has Phenotype | no | ||
Description | A member of the cytokinin-responsive type-A response regulator family. | ||
Curator Comment | Type-A responsive regulators were identified in rice with the rational that they shared high similarity with the conserved D-D-K residues and short N- and C- terminal extensions found in Arabidopsis type-A responsive regulators. |
Protein |
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Nucleotide (DNA) |
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 4 | 21,851,883-21,855,731bp | View Comparative Map | |||
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Map Position [ View in Marker DB ] | |||||
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# | Map Set Name | Linkage Group | Start Position | Stop Position | CMap Feature Acc |
1 | Rice japonica MSU6 | Chr. 4 | 21851883 bp | 21855731 bp | grjp2009a-4-GR:0020055 |
Molecular Function | phosphorelay response regulator activity (GO:0000156) |
Biological Process | phosphorelay signal transduction system (GO:0000160), regulation of transcription, DNA-dependent (GO:0006355), response to cytokinin stimulus (GO:0009735) |
Environment | unknown environment (EO:0007403) |
Chr | Start | Stop | Exp | Num. SNP Positions | |
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chr4 | 21,851,883 | 21,855,731 | ~160K SNPs x 20 accessions (McNally 2... | 7 | Search for SNPs |
chr4 | 21,851,883 | 21,855,731 | '1536 chip' - 1311 SNPs x 395 rice ac... | 1 | Search for SNPs |
chr4 | 21,851,883 | 21,855,731 | Huang X, et al, Nat Genetics 2010 Nov... | 25 | Search for SNPs |
chr4 | 21,851,883 | 21,855,731 | RiceDiversity 44K SNP assay, 34 trait... | 25 | Search for SNPs |
chr4 | 21,851,883 | 21,855,731 | RiceDiversity 44K SNP assay, 34 trait... | 5 | Search for SNPs |