Species | Oryza sativa (Rice) [ GR_tax:013681 ] | ||||
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Accession | GR:0020031 | ||||
Gene Symbol | iaa27 | ||||
Gene Name | indoleacetic acid 27 | ||||
Synonyms (4) |
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E.C. Numbers (0) | |||||
Pathway Reactions (2) |
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Chromosome No. | 11 | ||||
Gene Type | CDS (Protein coding) | ||||
Has Phenotype | no | ||||
Description | Early auxin responsive gene. Aux/IAA genes encode short-lived transcriptional factors that act to repress the expression of early auxin response genes when auxin concentrations are low. | ||||
Curator Comment | Likely ontology Bio process: GO:0006445, GO:0045449, GO:0009733 Cellular componant: GO:0005634, GO:0009536 |
Protein |
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Nucleotide (DNA) |
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 11 | 6,331,645-6,338,061bp | View Comparative Map | |||
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Map Position [ View in Marker DB ] | |||||
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# | Map Set Name | Linkage Group | Start Position | Stop Position | CMap Feature Acc |
1 | Rice japonica MSU6 | Chr. 11 | 6331645 bp | 6338061 bp | grjp2009a-11-GR:0020031 |
Plant Structure | coleoptile (PO:0020033) |
Plant Growth and Development Stage | leaf production stage (PO:0007133) |
Cereal Plant Growth Stage | 02-seedling (GRO:0007047) |
Cellular Component | plastid (GO:0009536) |
Biological Process | response to auxin stimulus (GO:0009733) |
Environment | laboratory study (EO:0007255), unknown environment (EO:0007403) |
Chr | Start | Stop | Exp | Num. SNP Positions | |
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chr11 | 6,331,645 | 6,338,061 | ~160K SNPs x 20 accessions (McNally 2... | 0 | |
chr11 | 6,331,645 | 6,338,061 | '1536 chip' - 1311 SNPs x 395 rice ac... | 0 | |
chr11 | 6,331,645 | 6,338,061 | Huang X, et al, Nat Genetics 2010 Nov... | 31 | Search for SNPs |
chr11 | 6,331,645 | 6,338,061 | RiceDiversity 44K SNP assay, 34 trait... | 31 | Search for SNPs |
chr11 | 6,331,645 | 6,338,061 | RiceDiversity 44K SNP assay, 34 trait... | 0 |