Accession Name | De Abril |
---|---|
Institute(s) Holding Accession | |
Accession Number | IRGC50463 |
Synonym(s) | |
Germplasm Type | N/A |
Genus | Oryza |
Species | sativa |
Subspecies | |
Subtaxa | |
Taxonomy Cross-Reference | GR_tax:013681 |
Title | Design | Polymorphism Type | Allele Scoring Protocol | PI(s) | Comments | Data |
---|---|---|---|---|---|---|
Genetic structure and diversity in Oryza sativa L. | 234 rice accessions from wide geographical regions of the world genotyped at 169 nuclear and 2 chloroplast loci to elucidate diversity within subspecies Oryza sativa indica and japonica | N/A | McCouch-S-R, Tai-T-H | Prediction of population structure was model-based (STRUCTURE) and based on data from 169 genomic SSRs. Reference: Garris et al., 2005. | Show Allele Data | |
Global dissemination of a single mutation conferring white pericarp in rice | Genotyping of 440 geographically and genetically diverse rice cultivars using the rice indel RID 12 primers | N/A | Sweeney/McCouch | Reference: Sweeney et. al. PLoS Genetics, 2007; Genotyping analysis revealed a single 14-bp deletion in the Rc gene is responsible for white pericarp in 97.9% of rice | Show Allele Data |
Stock Source | Seed Lot ID | Comments |
---|---|---|
IRRI | RA4965 | |
McCouch Lab | RA4965 | new as of Sweeney et. al. PMID:17696613 |
Trait | Value | Experiment |
---|---|---|
pericarp color | white | Global dissemination of a single mutation conferring white pericarp in rice |
Trait Name | Trait Protocol | Trait Values |
---|---|---|
pericarp color | Ten seeds per plant were dehulled and then visually inspected; PATO:0000322, PATO:0000323; ECO:0000002; GAZ:00004426 |
Collector | |
---|---|
Collection Number | |
Collection Source | |
Collection Code | |
Collection/Release date |
Country | |
---|---|
ISO3166 Country Code | |
State/Province | |
City | |
Locality | |
Gazetteer Ontology | N/A |
Elevation | |
Latitude | NA |
Longitude | NA |
Map |