Accession Name | Blue Rose |
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Institute(s) Holding Accession | |
Accession Number | CIor1962 |
Synonym(s) | |
Germplasm Type | N/A |
Genus | Oryza |
Species | sativa |
Subspecies | |
Subtaxa | |
Taxonomy Cross-Reference | GR_tax:013681 |
Title | Design | Polymorphism Type | Allele Scoring Protocol | PI(s) | Comments | Data |
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Genetic structure and diversity in Oryza sativa L. | 234 rice accessions from wide geographical regions of the world genotyped at 169 nuclear and 2 chloroplast loci to elucidate diversity within subspecies Oryza sativa indica and japonica | N/A | McCouch-S-R, Tai-T-H | Prediction of population structure was model-based (STRUCTURE) and based on data from 169 genomic SSRs. Reference: Garris et al., 2005. | Show Allele Data | |
Population Structure and Breeding Patterns of 145 U.S. Rice Cultivars Based on SSR Marker Analysis | 115 U.S rice cultivars and 30 ancestral rice accessions introduced from Asia were genotyped by means of 169 genomic SSR markers. | N/A | McCouch-S-R, Tai-T-H | Population structure was inferred using genetic-distance method with 169 SSR markers. Reference: Lu et al., 2005. | Show Allele Data | |
B-Gross/J-Yulin SNP Pi-ta study in AA Oryza; 143 accessions x 632 SNP | Genotyping of 143 germplasm accessions with 632 SNPs | N/A | Yulin Jia, USDA-ARS DBNRRC | Reference: Lee-S et. al, Genetics, vol 183, 2009. GR_ID:54910 | Show Allele Data |
Stock Source | Seed Lot ID | Comments |
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NSGC | RA5124 | [1] |
NSGC | CIor1962 | [2][6] |
Yulin Jia, USDA-DBNRRC | 2A02 | new as of B. Gross SNP set, 2010 |
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Gazetteer Ontology | N/A |
Elevation | |
Latitude | NA |
Longitude | NA |
Map |