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Germplasm "Azucena"

E.g., Germplasm "IRGC9542", RA4969, Basmati 1, Marker/locus RM22.
expand all sections collapse all sections  Germplasm "Azucena"
Accession Name Azucena
Institute(s) Holding Accession
Accession Number IRGC328
Synonym(s)
Germplasm Type N/A
Genus
Species
Subspecies
Subtaxa
Taxonomy Cross-Reference  
toggle section  Experiments (3)
Title Design Polymorphism Type Allele Scoring Protocol PI(s) Comments Data
Genome-wide patterns of nucleotide polymorphism in domesticated rice SNP Assay N/A Caicedo-A-L Reference: Caicedo et al., 2007. Pervasive positive selection shapes genome-wide patterns of nucleotide polymorphism in domesticated Asian rice (Oryza sativa). Data for the STS paper was generated based up on TIGRv3 pseudomolecules. The data in this system is based upon version 4. Show Allele Data
Selection under domestication: Evidence for a sweep in the rice Waxy genomic region SNP assay. Sequence analysis across 500-kb region centered on Waxy N/A Olsen-K-M Reference: Olsen et al.,2006. Show Allele Data
Global dissemination of a single mutation conferring white pericarp in rice Genotyping of 440 geographically and genetically diverse rice cultivars using the rice indel RID 12 primers N/A Sweeney/McCouch Reference: Sweeney et. al. PLoS Genetics, 2007; Genotyping analysis revealed a single 14-bp deletion in the Rc gene is responsible for white pericarp in 97.9% of rice Show Allele Data
toggle section  Related Stocks (2)
toggle section  Traits (1)
toggle section  Traits UOM (1)
toggle section  Collection Information
toggle section  Locality