Experiment "Candidate defense genes from rice, barley, and maize and ..."

Title	Candidate defense genes from rice, barley, and maize and their association with qualitative and quantitative resistance in rice
Design	QTL analysis. Testing for assoc. with resistance in rice to blast, bacterial blight, sheath blight, brown plant-hopper with 118 RGA or RFLP markers from rice, barley, maize. Markers placed on 116 DH lines from an IR64 and an Azucena.
Polymorphism Type (2)	RFLP, MARKER
Allele Scoring Protocol (2)	RFLP, General marker which scoring techniques were not clearly mentioned.
PI(s)	Leach-J-E, Leung-H
Comments	Reference: Ramalingam et al.,2003.

Germplasm (96)

Accession	Acc. Number	Seed Stock (Source)
IR64 x Azucena	NULL	Ir64xazu-100	Show Allele Data
IR64 x Azucena	NULL	Ir64xazu-608	Show Allele Data
IR64 x Azucena	NULL	Ir64xazu-232	Show Allele Data
IR64 x Azucena	NULL	Ir64xazu-335	Show Allele Data
IR64 x Azucena	NULL	Ir64xazu-31	Show Allele Data
IR64 x Azucena	NULL	Ir64xazu-417	Show Allele Data
IR64 x Azucena	NULL	Ir64xazu-105	Show Allele Data
IR64 x Azucena	NULL	Ir64xazu-631	Show Allele Data
IR64 x Azucena	NULL	Ir64xazu-236	Show Allele Data
IR64 x Azucena	NULL	Ir64xazu-336	Show Allele Data
IR64 x Azucena	NULL	Ir64xazu-35	Show Allele Data
IR64 x Azucena	NULL	Ir64xazu-424	Show Allele Data
IR64 x Azucena	NULL	Ir64xazu-107	Show Allele Data
IR64 x Azucena	NULL	Ir64xazu-936	Show Allele Data
IR64 x Azucena	NULL	Ir64xazu-251	Show Allele Data
IR64 x Azucena	NULL	Ir64xazu-351	Show Allele Data
IR64 x Azucena	NULL	Ir64xazu-39	Show Allele Data
IR64 x Azucena	NULL	Ir64xazu-429	Show Allele Data
IR64 x Azucena	NULL	Ir64xazu-110	Show Allele Data
IR64 x Azucena	NULL	Ir64xazu-1505	Show Allele Data
IR64 x Azucena	NULL	Ir64xazu-252	Show Allele Data
IR64 x Azucena	NULL	Ir64xazu-355	Show Allele Data
IR64 x Azucena	NULL	Ir64xazu-41	Show Allele Data
IR64 x Azucena	NULL	Ir64xazu-435	Show Allele Data
IR64 x Azucena	NULL	Ir64xazu-436	Show Allele Data
IR64 x Azucena	NULL	Ir64xazu-124	Show Allele Data
IR64 x Azucena	NULL	Ir64xazu-1508	Show Allele Data
IR64 x Azucena	NULL	Ir64xazu-272	Show Allele Data
IR64 x Azucena	NULL	Ir64xazu-356	Show Allele Data
IR64 x Azucena	NULL	Ir64xazu-47	Show Allele Data
IR64 x Azucena	NULL	Ir64xazu-55	Show Allele Data
IR64 x Azucena	NULL	Ir64xazu-438	Show Allele Data
IR64 x Azucena	NULL	Ir64xazu-146	Show Allele Data
IR64 x Azucena	NULL	Ir64xazu-1542	Show Allele Data
IR64 x Azucena	NULL	Ir64xazu-281	Show Allele Data
IR64 x Azucena	NULL	Ir64xazu-359	Show Allele Data
IR64 x Azucena	NULL	Ir64xazu-57	Show Allele Data
IR64 x Azucena	NULL	Ir64xazu-440	Show Allele Data
IR64 x Azucena	NULL	Ir64xazu-159	Show Allele Data
IR64 x Azucena	NULL	Ir64xazu-1544	Show Allele Data
IR64 x Azucena	NULL	Ir64xazu-284	Show Allele Data
IR64 x Azucena	NULL	Ir64xazu-361	Show Allele Data
IR64 x Azucena	NULL	Ir64xazu-67	Show Allele Data
IR64 x Azucena	NULL	Ir64xazu-442	Show Allele Data
IR64 x Azucena	NULL	Ir64xazu-163	Show Allele Data
IR64 x Azucena	NULL	Ir64xazu-1564	Show Allele Data
IR64 x Azucena	NULL	Ir64xazu-288	Show Allele Data
IR64 x Azucena	NULL	Ir64xazu-372	Show Allele Data
IR64 x Azucena	NULL	Ir64xazu-69	Show Allele Data
IR64 x Azucena	NULL	Ir64xazu-455	Show Allele Data
IR64 x Azucena	NULL	Ir64xazu-169	Show Allele Data
IR64 x Azucena	NULL	Ir64xazu-1566	Show Allele Data
IR64 x Azucena	NULL	Ir64xazu-290	Show Allele Data
IR64 x Azucena	NULL	Ir64xazu-374	Show Allele Data
IR64 x Azucena	NULL	Ir64xazu-84	Show Allele Data
IR64 x Azucena	NULL	Ir64xazu-463	Show Allele Data
IR64 x Azucena	NULL	Ir64xazu-171	Show Allele Data
IR64 x Azucena	NULL	Ir64xazu-303	Show Allele Data
IR64 x Azucena	NULL	Ir64xazu-5	Show Allele Data
IR64 x Azucena	NULL	Ir64xazu-387	Show Allele Data
IR64 x Azucena	NULL	Ir64xazu-87	Show Allele Data
IR64 x Azucena	NULL	Ir64xazu-467	Show Allele Data
IR64 x Azucena	NULL	Ir64xazu-183	Show Allele Data
IR64 x Azucena	NULL	Ir64xazu-313	Show Allele Data
IR64 x Azucena	NULL	Ir64xazu-7	Show Allele Data
IR64 x Azucena	NULL	Ir64xazu-388	Show Allele Data
IR64 x Azucena	NULL	Ir64xazu-88	Show Allele Data
IR64 x Azucena	NULL	Ir64xazu-475	Show Allele Data
IR64 x Azucena	NULL	Ir64xazu-192	Show Allele Data
IR64 x Azucena	NULL	Ir64xazu-326	Show Allele Data
IR64 x Azucena	NULL	Ir64xazu-12	Show Allele Data
IR64 x Azucena	NULL	Ir64xazu-389	Show Allele Data
IR64 x Azucena	NULL	Ir64xazu-89	Show Allele Data
IR64 x Azucena	NULL	Ir64xazu-488	Show Allele Data
IR64 x Azucena	NULL	Ir64xazu-200	Show Allele Data
IR64 x Azucena	NULL	Ir64xazu-329	Show Allele Data
IR64 x Azucena	NULL	Ir64xazu-13	Show Allele Data
IR64 x Azucena	NULL	Ir64xazu-391	Show Allele Data
IR64 x Azucena	NULL	Ir64xazu-90	Show Allele Data
IR64 x Azucena	NULL	Ir64xazu-489	Show Allele Data
IR64 x Azucena	NULL	Ir64xazu-210	Show Allele Data
IR64 x Azucena	NULL	Ir64xazu-331	Show Allele Data
IR64 x Azucena	NULL	Ir64xazu-21	Show Allele Data
IR64 x Azucena	NULL	Ir64xazu-398	Show Allele Data
IR64 x Azucena	NULL	Ir64xazu-94	Show Allele Data
IR64 x Azucena	NULL	Ir64xazu-550	Show Allele Data
IR64 x Azucena	NULL	Ir64xazu-226	Show Allele Data
IR64 x Azucena	NULL	Ir64xazu-332	Show Allele Data
IR64 x Azucena	NULL	Ir64xazu-22	Show Allele Data
IR64 x Azucena	NULL	Ir64xazu-403	Show Allele Data
IR64 x Azucena	NULL	Ir64xazu-97	Show Allele Data
IR64 x Azucena	NULL	Ir64xazu-582	Show Allele Data
IR64 x Azucena	NULL	Ir64xazu-228	Show Allele Data
IR64 x Azucena	NULL	Ir64xazu-333	Show Allele Data
IR64 x Azucena	NULL	Ir64xazu-25	Show Allele Data
IR64 x Azucena	NULL	Ir64xazu-412	Show Allele Data

Markers (333)

Marker Name
Markers 1 to 25 of 333. of 14 \| Next
1700a(Rp1)	Show Allele Data
1700b(Rp1)	Show Allele Data
1700c(Rp1)	Show Allele Data
1700d(Rp1)	Show Allele Data
6.31a	Show Allele Data
A10K250	Show Allele Data
A18A1120	Show Allele Data
A3E396	Show Allele Data
A5J560	Show Allele Data
AC5	Show Allele Data
Adh1	Show Allele Data
AF6	Show Allele Data
AG8-Aro	Show Allele Data
AldRed(Barley)	Show Allele Data
Amp2	Show Allele Data
Amp3	Show Allele Data
Amy1AC	Show Allele Data
Amy1B	Show Allele Data
Amy2A	Show Allele Data
Amy3ABC	Show Allele Data
Amy3DE	Show Allele Data
BBphen	Show Allele Data
C711	Show Allele Data
Cat1	Show Allele Data
CDO105	Show Allele Data

Phenotype Data (96)

Download Phenotype Data

Traits (1)

Trait Name	Trait Ontology Accession	Phenotype Measurement
bacterial blight disease resistance	TO:0000175	Resistance to PXO 86 and PXO 79.