Experiment "Characterization of the main effects, epistatic effects a..."

Title	Characterization of the main effects, epistatic effects and their environmental interactions of QTLs on the genetic basis of yield traits in rice
Design	QTL analysis of main effects underlying 4 yield traits, population 240 RILs. Genetic linkage map constructed with 220 loci. Mixed linear model used to detect QTL.
Polymorphism Type (3)	SSR, RFLP, MARKER
Allele Scoring Protocol (3)	SSR, RFLP, General marker which scoring techniques were not clearly mentioned.
PI(s)	Xing-Y-Z
Comments	Reference: Xing et al.,2002.

Germplasm (241)

Accession	Acc. Number	Seed Stock (Source)
Zhenshan97 x Minghui63	NULL	Zh97xmi63-173	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-237	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-50	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-114	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-125	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-189	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-2	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-66	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-141	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-205	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-18	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-82	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-157	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-221	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-34	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-98	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-174	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-238	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-51	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-115	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-126	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-190	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-3	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-67	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-142	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-206	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-19	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-83	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-158	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-222	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-35	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-99	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-100	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-175	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-239	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-52	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-116	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-127	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-191	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-4	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-68	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-143	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-207	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-20	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-84	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-159	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-223	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-36	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-37	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-101	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-176	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-240	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-53	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-117	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-128	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-192	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-5	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-69	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-144	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-208	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-21	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-85	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-160	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-224	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-38	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-102	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-177	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-241	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-54	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-118	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-129	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-193	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-6	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-70	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-145	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-209	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-22	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-86	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-161	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-225	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-39	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-103	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-178	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-55	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-119	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-130	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-194	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-7	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-71	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-146	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-210	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-23	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-87	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-162	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-226	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-40	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-104	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-179	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-56	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-120	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-131	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-195	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-8	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-72	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-147	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-211	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-24	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-88	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-163	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-227	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-41	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-105	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-180	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-57	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-121	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-132	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-196	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-9	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-73	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-148	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-212	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-25	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-89	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-164	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-228	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-229	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-42	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-106	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-181	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-58	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-122	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-133	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-197	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-10	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-74	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-149	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-213	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-26	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-90	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-165	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-166	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-230	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-43	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-107	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-182	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-59	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-123	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-134	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-198	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-11	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-75	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-150	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-214	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-27	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-91	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-167	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-231	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-44	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-108	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-183	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-60	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-135	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-199	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-12	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-76	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-151	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-215	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-28	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-92	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-168	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-232	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-45	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-109	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-184	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-61	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-136	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-200	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-13	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-77	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-152	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-216	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-29	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-93	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-169	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-233	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-46	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-110	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-185	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-62	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-137	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-201	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-14	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-78	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-153	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-217	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-30	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-94	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-170	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-234	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-47	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-111	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-186	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-63	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-138	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-202	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-15	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-79	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-154	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-218	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-31	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-95	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-171	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-235	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-48	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-112	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-187	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-64	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-139	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-203	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-16	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-80	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-155	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-219	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-32	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-96	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-172	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-236	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-49	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-113	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-124	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-188	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-1	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-65	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-140	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-204	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-17	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-81	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-156	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-220	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-33	Show Allele Data
Zhenshan97 x Minghui63	NULL	Zh97xmi63-97	Show Allele Data

Markers (221)

Marker Name
Markers 1 to 25 of 221. of 9 \| Next
C1003B	Show Allele Data
C1016	Show Allele Data
C1023	Show Allele Data
C104	Show Allele Data
C107	Show Allele Data
C1087	Show Allele Data
C112	Show Allele Data
C1121	Show Allele Data
C1176	Show Allele Data
C1232	Show Allele Data
C1237	Show Allele Data
C1368	Show Allele Data
C1447	Show Allele Data
C148	Show Allele Data
C1496	Show Allele Data
C153A	Show Allele Data
C153B	Show Allele Data
C161	Show Allele Data
C1633	Show Allele Data
C2	Show Allele Data
C223	Show Allele Data
C226	Show Allele Data
C2340	Show Allele Data
C246	Show Allele Data
C2807	Show Allele Data

QTL (0)

Phenotype Data (241)

Download Phenotype Data

Traits (4)

Trait Name	Trait Ontology Accession	Phenotype Measurement
1000-grain weight	TO:0000382	Grain weight was measured as the average weight of 1000 filled spikelets, measured in grams, averaged over three samplestaken from bulk harvested grain from the ten plants.
Grain yield per plant	TO:0000449	Yield per plant was determined, in grams, as the average weight of bulked harvested grain per plant from at least ten plants.
Grains per plant	TO:0000440	Grains per plant was measured as the average number of filled spikelets per plant calculated for the ten plants.
Number of tillers	TO:0000346

Database Cross-References (0)