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Allele data for germplasm "L-WA4" from the experiment "Hamblin et al (2004) Comparative Population Genetics of the Panicoid Grasses: Sequence Polymorphism, Linkage Disequilibrium and Selection in a Diverse Sample. Genetics 167:471-483".

E.g., Germplasm L-WA58, Marker/locus pSB0080.

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Germplasm
Accession Name

Germplasm
Accession
Number

Subsp.
& subtaxa

Country of
Origin

Stock
Number

Locus
name
Genotype
View All Genotypes on
Marker
L-WA4   verticilliflorum, NULL Kenya   cuigd-0033 TGTGGCCTTGGCTGCCAGCCAGCCGCCGTTGGGGCTCGCAGCCTCGGCGG
ACATGGCGAGCACCACGAACAGTGCAGCGAGTGCAGCCACCTTTGAGGAG
ATGGAGATCACGGCGGCGGACATCGTCGTCTCAGCTCGATCGATCGAACC
AGCTATAGTCGATCACCTACAATTTTCAAGAACAGCGAGTG---------
----------TTCGGTCGGTGTTTTTCTTGGTCGATCGGTGGACGACACT
GCTGGTGCTTTTT-ATAGGCAGGCGAAAGCCGGCCGGATTGATCGAATTG
GCATCAAGGGTCGCCGTTGGGCTCGTCGCGTACGACGGGCT------
View all "cuigd-0033" genotypes
L-WA4   verticilliflorum, NULL Kenya   cuigd-0088 CCAGTAGCGTGGATAAGTTTGGAGCGCGCA-AATCAGAAAAAGTGCTGCA
TGTTCATGCAACAAGATGCAGCTTCTTCGCAAACCCTGCTCTCACGTCGT
GGCTGTCTGCTGTCAAATTGGAGTTACTTCTACATACATGTCCCCGTACT
ACAGCTTGACCTGTCTAGGTAATACTTGGAGTACAAAATTCAAAGTAGCT
GATAATTTGTTCAAGTACCGAGAATCCATTCAATTCAGCTGGGAGAAGAA
GACGCTAACTTGGATGCCGGACAAAAAGCTGGAGTGTGGCTTTCCTGGTT
TTCTAACATCAGACTGCACACAAACTGCCACAGAAGAGGAAGA
View all "cuigd-0088" genotypes
L-WA4   verticilliflorum, NULL Kenya   cuigd-0122 GAGCTTTCAACTACTACCATAGAAAACCTGAAGTTTGGAAACAGTTGGTG
CAGAAAGACATGAAGATCGATTTCAGCTGGGATACTTCAGCTTCCCAATA
CGAAGAAATCTATCAGAGAGCAGCGGCTCGAGCCAGGGCAACAGCGTAAA
TAGCAGAGACAGTTCCCTACTGCCTCTGTGAAGTCTCCTAGATGCTGTGC
TTAACCGTATGGTAAAGAAATATGGTTGTATCAGCTCTAAATTAAGCATA
TGCTGAAGAAGCACGGTGCTTCCCTACTTGGGTATACTAAGGGCGACTTG
GCG
View all "cuigd-0122" genotypes
L-WA4   verticilliflorum, NULL Kenya   cuigd-0142 GCGCCTGAGGTTCTTCTTGGCGCCACACACTACTCCACGCCGGTTGACAT
TTGGTCCGTGGGCTGCATATTTGGTACCATTTCGATGAGCTCAGAGATTC
TTGTCAATGCAAACTACTTAAGAATTCAAACCAACACATACAGTTTCTAA
TTTGGTTGTTAATGGCAGCTGAGTTGGTCACTAACCAGCCACTTTTCCCT
GGCGATTCTGAGTTGCAGCAGCTCCTCCACATCTTCAAGTAATACCTCCA
GTGCATTAGTTGATTGTTTGCTTGCTGGAATTCTTGGTGAGTGTCTCATG
TTAATGGCTATCCATCTTGTTCTTTGGATGAAAGGTTGCTGGGCACCCCA
AATGAGCAGATGTGGCCAGGAGTAGGCAAGCTGCCCAACTGGCACGTGTA
CCCTCAGTGGAAGCCCACTAAGC
View all "cuigd-0142" genotypes
L-WA4   verticilliflorum, NULL Kenya   cuigd-0161 AAGTGATGGAAAGACCTATCTCCACACTGGGGATTTTAGAGCATCAAAAT
CAATGCAATTGCATCCACTTCTCCAGAGAGGCAGGGTAAATTTGGTTTAC
CTGGACACAACATATTGCAATCCCAAATACAAGTAGGTATACGATAATCA
AGTTTTAGGCTTTTTCTCTTTGATTAGTACTTTGCTGAACATGGTAAACT
GTAGGTTCCCACCCCAGGAGGATGTTATTGATTTTGTTGTGAGGACAGCT
CAAAGATATCTAAAGAAACAGCCAAAAACCCTCATT
View all "cuigd-0161" genotypes
L-WA4   verticilliflorum, NULL Kenya   cuigd-0176 ACAAGACCAAAGATAAATTTGCATCTTTATCAAAATGGAATATCTATGTG
CATCTCAACGTCCTATAAGGTACACACTCATGAGAGTGCTGAGTGACAGT
GAGAGCTTACCAATGGTACACCACTTTTAGCTCGTTGTTCCAAATACGAT
GATGGTTTGAAGAAGGGACCATAAATTTCAGCCCACTTGCTTAGCTTCGA
ATGTATGTAAGGTGCTCCAACAGTGTCAGCCCAGAAGACAAGACCACCCC
TGCAAACAAAATTTTTTTGTAAATTCAAACGAAATGCTCATAATAGGCAC
CACACCTCCTTAAATCCATAAACAATACAATGTAGAAATGCATAAATGGT
AAATTGAGGACAATAATCATAATCATTGCATTACAAGAGGTTTAGCTTGT
ATTGACAC
View all "cuigd-0176" genotypes
L-WA4   verticilliflorum, NULL Kenya   cuigd-0193 AAGTCTTCCTTGTCTCGTCTGATATAGATAG----ATGCGAAGTTTCAGG
GCACCGTGCAGTTGTTTCGATCGCTGGGTTGCTCTACCTACCCAGGCTTG
CGTTAAGGGAGGGTATTCCTGTTTCTGAGTATGCTTGGTTTGGTGCTGCG
CAGATTGCCCTGGAACGCAGTCGGAGGAGGCGGGGAAGGCGGATGCCTGC
GCTGGGTGCCCCAACCAGCAGATTTGTGCCACCGCCCCCAAGGGCCCCGA
CCCCGGTAATTGGATCATTTCATGTCCTTATACAGATTCTGTGACTTGCT
CTGGTGCTGGTGTACTGTTATCCCCATCATATCATTTTGTTTTATCAGAA
ATTAGCTTAGTTTAGTTTCATTTTATTACAGTGGTTGTGGTTGTGGTTGT
GGATTTGG------TATTTTCTGTTTTCAGTACAAAATCCCCACTAAAGC
ATTTTAGATT
View all "cuigd-0193" genotypes
L-WA4   verticilliflorum, NULL Kenya   cuigd-0289 GGCTTCATGGCATGAATCAACATGGTGTCCTTAGTTGGGAAAACCGTATG
AAGATTCTCCTTGGCACTGCAAAAGCGTAAGTTTGGAATTTGGATATGTT
TCACTTTATTTCCTGAAATCTTGTTTAACATGGACTGCCGGTGTTCATGA
TTTGCAGTCTCGCGTACCTTCATGAGGCCATAGACCCCAAAGTTGTACAC
AGAGATATCAAGTCAAGCAATATCTTAATCGACGATGAATTCAACAGCAA
GGTTTCTGATTTTGGGTTGGCTAAACTTCTGAATTCTGACAAAAGTCATA
TCAATACAAGAGTGATGGGAACATATGGGTATAGCTCTGTTTTTATGATG
TTCCTTTTCTTATTGTTAGCTCTTCTATTCATCTGGAAAACTGGAGAGAA
GT
View all "cuigd-0289" genotypes
L-WA4   verticilliflorum, NULL Kenya   cuigd-0402 TGCTTGTCATTTGCCTTAAGATGAAAATCTGAATCCATCTGTCAGATCTC
AGATCTGTACCATTTAAACATGCATCGATCAGTGTCCTGAAAAAAACACT
ACCAGAAAACTAGGATAAAAAGATGAGTTGACTAATCCTATGCATGAGTT
CACCAGAAAACTAGAATAAAATATGAGTTGACTAATTCTATGTATGACTT
CTTACAAGGAGCTTATTAAATCAATATTCTCAACAAACAGACACTAGAAT
ATGTCATAAATAGACACATGTATTATCTCTAGTTGGTTGATAACTGGACA
TATGAGCAGAGAAGAACAACAAAAGTCTTCCAGAAAATTATATGT
View all "cuigd-0402" genotypes
L-WA4   verticilliflorum, NULL Kenya   cuigd-0446 GTGGTGATAGGGAAGGGACAGTTTGAACAAGAAAGAGCAAAGCCTAATGT
CTTAGCGGTAACCATTTCATCATAACTCCCAAGTATATTTAAGTGGTTAC
TACTGCGTAGACGACAACAAAACAAATACCATTGAAAAATTGTCGTTGGT
GTCTTTTCCCTTGGGATGCAGGAGGGGGAGCTGCTGGCGCTGCTTAGGGA
CGAGCAGGACGAAGAAGACCGGATGATCCAGACCGACATCAGCGATGAAG
ACCTCTTGAAGCTGATGGACCGCAGCGACCTGTCCGGACCACCTGGTGCT
GCCGATGCCACACCACTGATCCCGCTGAAAGGTCCTGGCTGGGAGGTCGT
GGTGCCAGCCAAGAGCGGTGGCGGTATGCTCTCGTCGCTCACCAGCTGAG
C
View all "cuigd-0446" genotypes
L-WA4   verticilliflorum, NULL Kenya   cuigd-0455 NNNNNNNNNNNNNNNNNNNNNNNNCGTCTACGGCATCGACGAGAAGGGCC
CGGAGAAGATGGTGCTCGTGTTCGACCTCTCGGCGGCGGCACGTTCGACG
TCAGCGTCCTGGCCATCGACAACGGCGTCTTCGAGGTGCTCGGCACCAAC
AACGGCGACACCCACCTCGGA-GCGAGGACTTCCACCAA----TCATGGA
CTACTTCATCAAGCTCATCAAGGGTAAGAACGGCCGGGACATCTCCGGCG
ACGCTCGCGCGCTAGGGAAGCTTCGCCGCGAGTGCGAGCACGCCAAGCGC
GCGCTCAGCAACCAGCACCAGGTGCGCGTGGAGATCG
View all "cuigd-0455" genotypes
L-WA4   verticilliflorum, NULL Kenya   cuigd-0487 AGGCGGTGGTGAACTCGGAGTGCAGCCGCCTGTCCATCGCCACGTTCCAG
AACCCGGCACCCGACGCGACGGTGTACCCGCTGGCCGTGCGGGAGGGGGA
GGCGCCCATACTGGACGATCCCATCACCTTCGCCGAGATGTACCGCCGCA
AGATGGCACGCGACATCGAGCTCGCCAAGCTCAAGAAGCAGGCCAAGGCT
GAGAAGCAGCAGAAGATTGCCAAGGAGTTCGCCGTGCCGACTGCCAAGGA
ATTCGCCGTGCCGAACGCCAAGCCTCTCGACGACATTCTTGCCTGATAAG
GCGACTGATCCATTGATCCACGGTTTTATATCGTCGCGTGTGATTTCATT
TATAACTAAGAACATTGCTATATACGAGCGTGTGGCAATTAA
View all "cuigd-0487" genotypes
L-WA4   verticilliflorum, NULL Kenya   cuigd-0501 TCTGCTTCGATCCAGCCAGGAGCTTACTGTACTGATGAAATCATCAGGTG
TTGTCCGTTGTTAATATCTTAGCTATTCCAGATGGCACATCAGCTCCCGG
AGCCTGAAACAATCAACACAAGCAGCAACAGCTAGCTAGCATCTGAATAT
ATTGTCAACAGGAAGATTAAGAA
View all "cuigd-0501" genotypes
L-WA4   verticilliflorum, NULL Kenya   cuigd-0540 GGTCGTGCAGCGGCAGCGTCGCGCCGGCCGGGAAGCAG---AAGACGCCG
ATCTGCGTGGTGGGCAGGGACGCCGGAATTAATAATCAGTACAAGCACAA
CACGTACAGCGGATGAGCACGACCGACCACGATCTGCTCCGGCTAAACAC
AGCAGCCCTGCA----TGCATGCTTACCGAGAAATCGTGGCACTGGTGTA
----TGTGCATGCACATAGGTGATCCGCGTGAACGCCGGCGCCGGCAGGA
GGCG--GTGGCCGCTCGCTCTTGGGGCTCAGCTCGTCGTCGCACGA----
GCAGGATGATGTCGGCGATCCCGACGCCGGCTGCCTCCACACCAATCTGA
ACCAAATAGAAACAC----AGCAGGGGACGCAAGTTGTCAGTCGTCTTC-
--ATTCACCGGC-GAACGCGAACGCGAACGCGAACACAAATTAAAG
View all "cuigd-0540" genotypes
L-WA4   verticilliflorum, NULL Kenya   cuigd-0543 GCCTGTTGACATATGGTCTGTTGGCTGCATTTTTGGTACGATTTTGATGA
GATCAGATATCACTTTTCAATGCAAGCTGCTTCAGAATTTACACCGACAC
ATCTAGATATTCTAACCTGGTGTAAATTGCAGCTGAGTTGGTCACTAACC
AGCCACTTTTCCCTGGTGACTCCGAGTTGCAGCAGCTGCTCCACATCTTC
AAGTAATGTTGCCAGTGCCATAGTTCATTGTTTGATATTTTGATACTGTC
TGATACTGAAGACCTTGGTGAGTGGTGACTGTCTGATACTGACTGATCCA
TCCTGTTTCCTCGAATGCCAGGTTGCTGGGCACCCCGAATGAGGAGGTGT
GGCCAGGCGTTGGCAAGCTGCCCAATTGGCACGTG
View all "cuigd-0543" genotypes
L-WA4   verticilliflorum, NULL Kenya   cuigd-0581 TTCTATCTGGCTCATCAGCTTATCAGGAGGGCACTAAACATTCCAGGCGC
ATCAATCCATTGGTATGCAAAGCCAGGTTAGCTTACTCACACAAAACATT
CTTGCTTCCCTATGTCAGGAAATATCATTTAGAATACTTTTCTTTCAGAG
ATGCGGAAGCAAAGGAAGATGGGTCATATTACAATTGTGGGGTCTTCTAA
GACAAGTGTAAAATCACGCTTGGATAATTTGCTGCAAAGCAACTCGTCTG
ATCCCAAGCAAGGTATTGCAGTCACAAATCTTTTGGTCGCTCTGAATCAT
ATATAACAGTTCATTGCTATTGTTTTATCTGTTCCGGATTG
View all "cuigd-0581" genotypes
L-WA4   verticilliflorum, NULL Kenya   cuigd-0616 CTTTGTTCTGTTCATAGATTTTCAGTGAGCAATATAGTATTGCAACAGCA
ACATAAACTATTTCTTTCTCATATGCAGCACTAGTCACCACCTTCAATAT
TGAGATTGGTATCACTGGTGCTATATTGACTAAATTGGATGGTGACTCCA
GGGGCGGAGCCGCACTAAGTGTTAAAGAGGTAGTCATTTACCAGAAATCA
TTTCTATTAGTTGATGATGCAAAGAAGATTATTATCTATCAATTTTACTA
TTCAACTTCAC
View all "cuigd-0616" genotypes
L-WA4   verticilliflorum, NULL Kenya   cuigd-0639 TCGGCAACAATTCACATGGCAGTGGTGACAAAGGAAATGGCTTGCCCAAT
GGTGAGCTGCTGCACCACATGTCCGCGAATCTTGGGTTTGTGATACTGAT
ATAGACTAGACCACTAACCTGATTTACCGACTTTCTGATTCGAAAAGTAG
CGAC-TCTTTCTCAGGTATCGGCCTGTGTTTTCTATAGGTTCTTTAAACA
GTGTTGTAATAATATGATATGATGATCCGGCATGTCCGACGTTGAAGTTT
GCTGCTGGTTCTCCACAGTGTTCTGAACAGTAGAAATTTCAAGATGAAAT
CCGGTGGTGCTCTAGCTCTACCTTGTAAACTGCACGATCGTTGTGTAAGG
AAAATTTTTATCACTCGCCGCCCTTTTCATTGGGC
View all "cuigd-0639" genotypes
L-WA4   verticilliflorum, NULL Kenya   cuigd-0640 CTGATTCCTGGACAGGACAGAGAAAGTATGGAGCAGCTAGGGAGAAGTTA
CTTGAATGAACTGATCAATAGAAGCTTGGTCCAGCCAACCAAGGTTGGGG
TAGATGGGACAAACGTGAAACAGTGCAGAGTTCATGATGTCATACTTGAG
TTCATTGTGTCAAAGGCTGTGGAGGAAAACTTTGTTACTATATGGAATGG
TGATGGTTTTTCTAGAAATTATTCTTCAAACAAGATTCGTCGATTATCCA
TCCGGAATGTCAAATCTGCCCAGGCGGCGAAAGAGATTGCCAGGACAATA
AAAAATGGAGCTCATATTAGATCAATTAATGTATATCAATCTGACTATAG
CCTGCTCAAAGAGCATGTCTCTGAG, CTGATTCCTGGACAGGACAGAGA
AAGTATGGAGCAGCTAGGGAGAAGTTACTTGAATGAGCTGATCAATAGAA
GCTTGGTCCAGCCAACCAAGGTTGGGGTAGATGGGACAAACGTGAAACAG
TGCAGAGTTCATGATGTCATACTTGAGTTCATTGTGTCAAAGGCTGTGGA
GGAAAACTTTGTTACTATATGGAATGGTGATGGTTTTTCTAGAAATTATT
CTTCAAACAAGATTCGTCGATTATCCATCCGGAATGTCAAATCTGCCCAG
GCGGCGAAAGAGATTGCCAGGACAATAAAAAATGGAGCTCATATTAGATC
AATTAATGTATATCAATCTGACTATAGCCTGCTCAAAGAGCATGTCTCTG
AG
View all "cuigd-0640" genotypes
L-WA4   verticilliflorum, NULL Kenya   cuigd-0688 AGTACTTCATCAGGCTCAACTCCGGCGGCAAGGACAAGAGGAGATCCAGC
ATTCATGACATTACCACTGTGAACCTGACGGACGAGCAGCCTCCATCACC
ATCCCAGTCCTCTCTGATCACCAACCAGTCAAACGCATCAGCTCCGACTG
CGGGGATAGGCCAGTTCTCATTGGCAGCCGATGCCAAGCAACACGGTTCT
GGAAATCTGCCCTTCAATTCACCAAGCCGGACCTCTGTGATGGCGG
View all "cuigd-0688" genotypes
L-WA4   verticilliflorum, NULL Kenya   cuigd-0703 TGCAGGGTCGTCTATGACACCTGCAATCCCCTTAT--GATTCGCATATTT
CAGTGACCATTTACCGATTCCATCTCAGATATCTTTCTCATCATCAATGG
AGGTGGGTATAGTCCCAGACAACATGGCAACGACGACAGACATGCCAAAC
TCCGGCATCCTGCTGACACCTGCTGGGGCCATCAGCCTCTTCTCGTCAGG
TTCTTCGCTTCAGATGCCACTCCACTTGACCTCCATGGACAGAGAGGCCA
GGGTCCTCAGGTACAAGGAGAAGAAGAAGAGCAGAAAGTTCGCGAAGACC
ATACGATATGCGACGAGGAAGACATATGCAGAAGCAAGGCCGAGGATCA
View all "cuigd-0703" genotypes
L-WA4   verticilliflorum, NULL Kenya   cuigd-0716 ATTGATGATGCATGGCTGTGCCAGGCCAGCTGATTGATTGATTGATTGAT
TGGTTGATTGCAGGTGAGGTTCAATGGCGACGCCGGCAGCCTGGTGATCA
ACGGCACGGCGTACTACCTCAGGCAGATGCACTGGCACTCGCCGACAGAG
CACACCGTCGACGGCCGCAGGTCAGAGTCATCGTCATCCTCGTCTCTCGC
CGTTGAGGAGCTAATAATAAAGCCTTGACGTGAACCGCTTAATTACTCAT
TCCCTAATTGCTTAATTACTTACTAGTAACGGCTCTGAGATGTTGGTTCG
TCGCGTGCGCCCGTGCTCGCAGGTACGACATGGAGCTGCACCTGGTGCAC
CAGACCTTGGCGAACAAGACGGCG
View all "cuigd-0716" genotypes
L-WA4   verticilliflorum, NULL Kenya   cuigd-0747 AGCTGAGCTAAAAGATGACAGTGAGTTTCCCTTATTTCAGGCAAAACTTT
GATTATGTTTGGCTTATTAGAGTTTAGATGTGGCCATGGTTATTAAGGCG
TCGCTTCAGCGTTGCTTAAGCAGCTGAGCGGTCCAGGGTTGCCCCAGGGG
CAAAGGTGACACCCTTTGGCCTTATGCGCATGCTGATGCCCCCTGGTTCC
GCCTTCTCGTCGATTCTGCTGCTGGCCTGCTCGATTTTGCTTCTGCTGGC
TTGATTTCTTCCATCTCCCGCTTGCCAATTGCTCAATCTGGAAGGGGACA
GCGG
View all "cuigd-0747" genotypes
L-WA4   verticilliflorum, NULL Kenya   cuigd-0851 ATGTTTGCGCACAGAAGGATTCTGAGGTGTCACATGATTTGGAATTTGAC
AAGTCCTATGGAGGTAAGGTACCTTCTTTCCCTTCTGGTGGCCCACCATC
TCTTATGTTGAGCAGGGGAGATGATACTGATGCTGGTAATGTCAGTGGTT
TCATCTCAAAACAGTCTGGTTTGGGACGTGCAGCAAGGAGACAGTTAGCA
GCAATTCTTGATGAGTTCTGGGGGCAACTTTTTGATTATCATGGTAAACT
TACACAAGAGGCCAACAATAAAAGGTTCAACTATTTGATTGGACTGGACT
TGAGAGCAGCTGGTTCTGCTGTGAGGAAAGATAACCTATCAATTGAAGCT
TCCAGTAACTCAATGATGAGAGATGTAATGCAAGGGTCAGCTACTGTA
View all "cuigd-0851" genotypes
L-WA4   verticilliflorum, NULL Kenya   cuigd-0860 CTACCATTGGAAGCAGGTAATTAAGCATAACAATTGTTTAAACTCCTGAC
AGCCTCCCACTAGTTTTGTGATTGCCACGCTAACAGGGTGGTGCCAACTG
GATGCAGTTCATCCATTTTCAGTCAAACTTATCGTTAGGACTTAGGAAGC
ATGCAGAAATTATAAATAGTAATTTTCACTCAAATAATTTTATGACATAT
AGTAGTTTATTAGCTAGTCGAATTATTTGTTCTTGCATGGTGGGTGCCTT
GGATGGGTATTAATAGTAATTATTACCCCATGCATAATGCACGAATGTAC
AGGTGGTCGATCATCGCGGCACAGCTCCCTGGGAGGACGGACAACGACAT
CAAGAACTACTGGAACANNNNNNNNNNNNNNNNNNNNNN
View all "cuigd-0860" genotypes
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