Gramene Home
More ▼
Search »
Arabidopsis thaliana (TAIR10) ▼

Favourite species

All species

Recent locations

Variant displays

Configure this page

Custom tracks

Export data

Bookmark this page

ENSVATH14424029 SNP

Most severe consequence
 
missense variant
|See all predicted consequences
Alleles
C/G|Highest population MAF: < 0.01
Location

Chromosome 3:19433076 (forward strand)|VCF:3  19433076  ENSVATH14424029  C  G

HGVS names

This variant has 3 HGVS names - Show

External Links

Original source

The 1001 Genomes Project provides a catalog of genetic variation in the reference plant Arabidopsis thaliana. Launched at the beginning of 2008 to discover sequence variation in at least 1001 strains (accessions). Since 2010, several sets of genomes have been released. The first phase of the project was completed in 2016 with publication of a detailed analysis of 1,135 genomes. (release 2016)

About this variant

This variant overlaps 1 transcript and has 1106 sample genotypes.

Explore this variant

Graphical neighbourhood region
Upstream and downstream sequence
Diseases and traits (Not available)
LD plots and tables (Not available)
Sequence conservation via cross-species alignments (Not available)
Citations (Not available)

Using the website

Analysing your data

Reference materials