Arabidopsis thaliana (TAIR10) ▼ 
Summary
Splice variantsTranscript comparisonGene allelesSequenceSecondary StructureGene familiesLiteraturePlant ComparaPan-taxonomic ComparaOntologiesPhenotypesGenetic VariationVariant tableVariant imageStructural variantsGene expressionPathwayRegulationExternal referencesSupporting evidenceID HistoryGene historyGramene Search.
Transducin/WD40 repeat-like superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:817857]
ARABIDOPSIS THALIANA CONSTITUTIVE PHOTOMORPHOGENIC 1, ATCOP1, CONSTITUTIVE PHOTOMORPHOGENIC 1, DEETIOLATED MUTANT 340, DET340, EMB168, EMBRYO DEFECTIVE 168, FUS1, FUSCA 1, T21L14.11, T21L14_11
Chromosome 2: 13,977,881-13,983,609 forward strand.
This gene has 2 transcripts (splice variants), 167 orthologues and 27 paralogues.
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Showing the top 50 hits from Europe PubMed Central
| PubMed ID | Title | Authors | Journal |
|---|---|---|---|
| 38620015 | B-Box transcription factor BBX28 requires CONSTITUTIVE PHOTOMORPHOGENESIS1 to induce shade-avoidance response in Arabidopsis thaliana. | Saura-Sánchez M, Gomez-Ocampo G, Pereyra ME, Barraza CE, Rossi AH, Córdoba JP, Botto JF. | Plant Physiol 2024 |
| 38600022 | Post-translational modifications: emerging directors of cell-fate decisions during endoplasmic reticulum stress in Arabidopsis thaliana. | Thibault E, Brandizzi F. | Biochem Soc Trans 52 (2) 2024 |
| 37887291 | Role of Phytochromes in Red Light-Regulated Alternative Splicing in Arabidopsis thaliana: Impactful but Not Indispensable. | Careno DA, Assaf CH, Eggermont EDC, Canelo M, Cerdán PD, Yanovsky MJ. | Cells 12 (20) 2023 |
| 38279311 | APRF1 Interactome Reveals HSP90 as a New Player in the Complex That Epigenetically Regulates Flowering Time in Arabidopsis thaliana. | Isaioglou I, Podia V, Velentzas AD, Kapolas G, Beris D, Karampelias M, Plitsi PK, Chatzopoulos D, Samakovli D, Roussis A, Merzaban J, Milioni D, Stravopodis DJ, Haralampidis K. | Int J Mol Sci 25 (2) 2024 |
| 38023835 | Role of miRNAs in sucrose stress response, reactive oxygen species, and anthocyanin biosynthesis in Arabidopsis thaliana. | Azad MF, Dawar P, Esim N, Rock CD. | Front Plant Sci 14 2023 |
| 37091499 | Regulatory networks of hormone-involved transcription factors and their downstream pathways during somatic embryogenesis of Arabidopsis thaliana. | Khadem A, Moshtaghi N, Bagheri A. | 3 Biotech 13 (5) 2023 |
| 37107650 | Abscisic Acid Inhibits Cortical Microtubules Reorganization and Enhances Ultraviolet-B Tolerance in Arabidopsis thaliana. | Shi L, Lin K, Su T, Shi F. | Genes (Basel) 14 (4) 2023 |
| 36968378 | GIGANTEA supresses wilt disease resistance by down-regulating the jasmonate signaling in Arabidopsis thaliana. | Patnaik A, Kumar A, Behera A, Mishra G, Dehery SK, Panigrahy M, Das AB, Panigrahi KCS. | Front Plant Sci 14 2023 |
| 36545005 | COP1 mutation causes low leaf temperature under various abiotic stresses in Arabidopsis thaliana. | Kim JY, Lee SJ, Min WK, Cha S, Song JT, Seo HS. | Plant Direct 6 (12) 2022 |
| 36466238 | Overexpression of TaMYC2 confers freeze tolerance by ICE-CBF-COR module in Arabidopsis thaliana. | Wang R, Yu M, Xia J, Xing J, Fan X, Xu Q, Cang J, Zhang D. | Front Plant Sci 13 2022 |
| 35806395 | BBX24 Interacts with DELLA to Regulate UV-B-Induced Photomorphogenesis in Arabidopsis thaliana. | Huang Y, Xiong H, Xie Y, Lyu S, Miao T, Li T, Lyu G, Li S. | Int J Mol Sci 23 (13) 2022 |
| 35628112 | Genetic Dissection of Light-Regulated Adventitious Root Induction in Arabidopsis thaliana Hypocotyls. | Zeng Y, Schotte S, Trinh HK, Verstraeten I, Li J, Van de Velde E, Vanneste S, Geelen D. | Int J Mol Sci 23 (10) 2022 |
| 36304200 | Temperature-mediated regulation of flowering time in Arabidopsis thaliana. | Brightbill CM, Sung S. | aBIOTECH 3 (1) 2022 |
| 35687579 | Photoreceptors' gene expression of Arabidopsis thaliana grown with biophilic LED-sourced lighting systems. | Beatrice P, Chiatante D, Scippa GS, Montagnoli A. | PLoS One 17 (6) 2022 |
| 35016218 | BBX17 Interacts with CO and Negatively Regulates Flowering Time in Arabidopsis thaliana. | Xu X, Xu J, Yuan C, Chen Q, Liu Q, Wang X, Qin C. | Plant Cell Physiol 63 (3) 2022 |
| 34485750 | Stomatal development and genetic expression in Arabidopsis thaliana L. | Chowdhury MR, Ahamed MS, Mas-Ud MA, Islam H, Fatamatuzzohora M, Hossain MF, Billah M, Hossain MS, Matin MN. | Heliyon 7 (8) 2021 |
| 38074475 | Elucidating the Temporal Patterns of Gene Expression in the Inferred Regulatory Interactions of GmCOL1b in Glycine max. | Alcantara M, Iftikhar H, Dzheyranyan D, Kagan K, Abbasi P, Alamilla A, Ayala N, Baca T, Benoit V, Clausen N, Coto C, Guerrero C, Hernandez Catalan E, Hurtado S, Lopez A, Lopez J, Majarian N, Mesfin N, Mishegyan A, Mkrtchyan G, Ordonez A, Pachanyan A, Pelayo T, Rosas A, Rowsey K, Sharma E, Sharma S, Van Grinsven S, Hanzawa Y. | MicroPubl Biol 2023 2023 |
| 36290757 | Metabolite Profiling of Paraquat Tolerant Arabidopsis thaliana Radical-induced Cell Death1 (rcd1)-A Mediator of Antioxidant Defence Mechanisms. | Sipari N, Lihavainen J, Keinänen M. | Antioxidants (Basel) 11 (10) 2022 |
| 35720591 | Phytochrome-Dependent Regulation of ZFP6 and ZFPH Impacts Photomorphogenesis in Arabidopsis thaliana. | Cota-Ruiz K, Oh S, Montgomery BL. | Front Plant Sci 13 2022 |
| 35457273 | Transcriptomic Data Meta-Analysis Sheds Light on High Light Response in Arabidopsis thaliana L. | Bobrovskikh AV, Zubairova US, Bondar EI, Lavrekha VV, Doroshkov AV. | Int J Mol Sci 23 (8) 2022 |
| 36233359 | HFR1, a bHLH Transcriptional Regulator from Arabidopsis thaliana, Improves Grain Yield, Shade and Osmotic Stress Tolerances in Common Wheat. | Sun G, Yang L, Zhan W, Chen S, Song M, Wang L, Jiang L, Guo L, Wang K, Ye X, Gou M, Zheng X, Yang J, Yan Z. | Int J Mol Sci 23 (19) 2022 |
| 38558526 | RACK1A promotes hypocotyl elongation by scaffolding light signaling components in Arabidopsis. | Fu Y, Zhu W, Zhou Y, Su Y, Li Z, Zhang D, Zhang D, Shen J, Liang J. | J Integr Plant Biol 66 (5) 2024 |
| 38096564 | From the archives: evolutionary origins of Delphinieae flowers, pseudogenes, and the light-responsive localization of COP1. | Chan C. | Plant Cell 36 (3) 2024 |
| 38343027 | COP1-ERF1-SCE1 regulatory module fine-tunes stress response under light-dark cycle in Arabidopsis. | Lin WC, Chang HH, Huang ZB, Huang LC, Kuo WC, Cheng MC. | Plant Cell Environ 47 (5) 2024 |
| 34463604 | Gibberellin regulates UV-B-induced hypocotyl growth inhibition in Arabidopsis thaliana. | Miao T, Li D, Huang Z, Huang Y, Li S, Wang Y. | Plant Signal Behav 16 (11) 2021 |
| 34276733 | New Insights on the Regulation of Glucosinolate Biosynthesis via COP1 and DELLA Proteins in Arabidopsis Thaliana. | Frerigmann H, Hoecker U, Gigolashvili T. | Front Plant Sci 12 2021 |
| 34884732 | Cryptochrome 2 from Lilium × formolongi Regulates Photoperiodic Flowering in Transgenic Arabidopsis thaliana. | Wu XM, Yang ZM, Yang LH, Chen JR, Chen HX, Zheng SX, Zeng JG, Jia GX, Li YF. | Int J Mol Sci 22 (23) 2021 |
| PPR495417 | Arabidopsis thalianarosette growth habit is a photomorphogenic trait controlled by the TALE homeodomain protein ATH1 and involves TOR kinase | Hajibehzad SS, Silva SS, Peeters N, Stouten E, Buijs G, Smeekens S, Proveniers M. | preprint (2022) |
| 34071961 | Beyond the Genetic Pathways, Flowering Regulation Complexity in Arabidopsis thaliana. | Quiroz S, Yustis JC, Chávez-Hernández EC, Martínez T, Sanchez MP, Garay-Arroyo A, Álvarez-Buylla ER, García-Ponce B. | Int J Mol Sci 22 (11) 2021 |
| 34405771 | UBC19 is a new interacting protein of ORANGE for its nuclear localization in Arabidopsis thaliana. | Chen WC, Wang Q, Cao TJ, Lu S. | Plant Signal Behav 16 (11) 2021 |
| 34729159 | High-resolution imaging as a tool for identifying quantitative trait loci that regulate photomorphogenesis in Arabidopsis thaliana. | Deslauriers SD. | AoB Plants 13 (5) 2021 |
| 37956407 | Functional divergence of Arabidopsis REPRESSOR OF UV-B PHOTOMORPHOGENESIS 1 and 2 in repression of flowering. | Chen S, Podolec R, Arongaus AB, Fuchs C, Loubéry S, Demarsy E, Ulm R. | Plant Physiol 194 (3) 2024 |
| 38431282 | Light signaling in plants-a selective history. | Huq E, Lin C, Quail PH. | Plant Physiol 195 (1) 2024 |
| 38513610 | CONSTANS, a HUB for all seasons: How photoperiod pervades plant physiology regulatory circuits. | Romero JM, Serrano-Bueno G, Camacho-Fernández C, Vicente MH, Ruiz MT, Pérez-Castiñeira JR, Pérez-Hormaeche J, Nogueira FTS, Valverde F. | Plant Cell 36 (6) 2024 |
| 32067033 | Genetic and molecular basis of floral induction in Arabidopsis thaliana. | Kinoshita A, Richter R. | J Exp Bot 71 (9) 2020 |
| 34654749 | Curvature thylakoid 1 proteins modulate prolamellar body morphology and promote organized thylakoid biogenesis in Arabidopsis thaliana. | Sandoval-Ibáñez O, Sharma A, Bykowski M, Borràs-Gas G, Behrendorff JBYH, Mellor S, Qvortrup K, Verdonk JC, Bock R, Kowalewska Ł, Pribil M. | Proc Natl Acad Sci U S A 118 (42) 2021 |
| 32860452 | Role of melatonin in UV-B signaling pathway and UV-B stress resistance in Arabidopsis thaliana. | Yao JW, Ma Z, Ma YQ, Zhu Y, Lei MQ, Hao CY, Chen LY, Xu ZQ, Huang X. | Plant Cell Environ 44 (1) 2021 |
| 38749091 | S-nitrosylation may inhibit the activity of COP1 in plant photomorphogenesis. | Zhang Q, Cai X, Wu B, Tong B, Xu D, Wang J, Cui B, Yin R, Lin L. | Biochem Biophys Res Commun 719 2024 |
| 32988993 | Multiple Loci Control Variation in Plasticity to Foliar Shade Throughout Development in Arabidopsis thaliana. | Ta J, Palmer C, Brock M, Rubin M, Weinig C, Maloof J, Runcie D. | G3 (Bethesda) 10 (11) 2020 |
| 38316905 | Arabidopsis COP1 guides stomatal response in guard cells through pH regulation. | Cha S, Min WK, Seo HS. | Commun Biol 7 (1) 2024 |
| 38635077 | Disrupting FKF1 homodimerization increases FT transcript levels in the evening by enhancing CO stabilization. | Cho SW, Lokhandwala J, Park JS, Kang HW, Choi M, Yang HQ, Imaizumi T, Zoltowski BD, Song YH. | Plant Cell Rep 43 (5) 2024 |
| 33074438 | Insights into the genes involved in the ethylene biosynthesis pathway in Arabidopsis thaliana and Oryza sativa. | Ahmadizadeh M, Chen JT, Hasanzadeh S, Ahmar S, Heidari P. | J Genet Eng Biotechnol 18 (1) 2020 |
| 32552524 | Bioinformatics analysis of BBX family genes and its response to UV-B in Arabidopsis thaliana. | Lyu G, Li D, Li S. | Plant Signal Behav 15 (9) 2020 |
| 38417841 | Flowering time: From physiology, through genetics to mechanism. | Maple R, Zhu P, Hepworth J, Wang JW, Dean C. | Plant Physiol 195 (1) 2024 |
| 38805221 | Alternative localization of HEME OXYGENASE 1 in plant cells regulates cytosolic heme catabolism. | Chen Y, Nishimura K, Tokizawa M, Yamamoto YY, Oka Y, Matsushita T, Hanada K, Shirai K, Mano S, Shimizu T, Masuda T. | Plant Physiol 2024 |
| 38708492 | Epigenetic regulation of high light-induced anthocyanin biosynthesis by histone demethylase IBM1 in Arabidopsis. | Fan D, Wang X, Liu T, Liu H, Peng Y, Tang X, Ye X, Sun K, Yue Y, Xu D, Li C, Luo K. | New Phytol 242 (6) 2024 |
| PPR851289 | Unequal genetic redundancies among MYC bHLH transcription factors underlie seedling photomorphogenesis in Arabidopsis | Garhwal V, Das S, Gangappa SN. | preprint (2024) |
| 33493201 | Natural variation in temperature-modulated immunity uncovers transcription factor bHLH059 as a thermoresponsive regulator in Arabidopsis thaliana. | Bruessow F, Bautor J, Hoffmann G, Yildiz I, Zeier J, Parker JE. | PLoS Genet 17 (1) 2021 |
| 33117813 | Spatial Nano-Morphology of the Prolamellar Body in Etiolated Arabidopsis thaliana Plants With Disturbed Pigment and Polyprenol Composition. | Bykowski M, Mazur R, Buszewicz D, Szach J, Mostowska A, Kowalewska Ł. | Front Cell Dev Biol 8 2020 |
| 38714132 | MYB4, a member of R2R3-subfamily of MYB transcription factor functions as a repressor of key genes involved in flavonoid biosynthesis and repair of UV-B induced DNA double strand breaks in Arabidopsis. | Banerjee S, Agarwal P, Choudhury SR, Roy S. | Plant Physiol Biochem 211 2024 |
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