Summary
- Splice variants
- Transcript comparison
- Gene alleles
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- Secondary Structure
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Plant Compara
Pan-taxonomic Compara
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Ontologies
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Genetic Variation
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Gramene is produced in collaboration with Ensembl Plants

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Gene: scpl50 AT1G15000

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Description

serine carboxypeptidase-like 50 [Source:NCBI gene (formerly Entrezgene);Acc:838065]

Gene Synonyms

serine carboxypeptidase-like 50, T15D22.4, T15D22_4

Location

Chromosome 1: 5,168,464-5,170,066 forward strand.

About this gene

This gene has 1 transcript (splice variant), 323 orthologues and 53 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
scpl50-201	AT1G15000.1	1603	444aa	AT1G15000.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A178WGD9 Q9M9Q6	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,

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Plant Compara

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data